RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 SDHAF3Q9NRP4 125 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 PLSCR4Q9NRQ2 329 aa12.55□□□□□ -0.4
SMARCA4-206ENST00000538456 FAM187AA6NFU0 413 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 LINC01387J3KSC0 135 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 CLOCKO15516 846 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 RAD51CO43502 376 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 FADS1O60427 444 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 ACVR1BP36896 505 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 RFX3P48380 749 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 CDH13P55290 713 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 TRA2BP62995 288 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 PSG6Q00889 435 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 OCRLQ01968 901 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 ZNF844Q08AG5 666 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 CTU2Q2VPK5 515 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 TCHHL1Q5QJ38 904 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 MARCH3Q86UD3 253 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 GGNQ86UU5 652 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 FAM9CQ8IZT9 166 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 FBXO25Q8TCJ0 367 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 DUSP19Q8WTR2 217 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 TMEM158Q8WZ71 300 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 GTPBP3Q969Y2 492 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 TRMT61AQ96FX7 289 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 GMPPAQ96IJ6 420 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 NAPGQ99747 312 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 C12orf49Q9H741 205 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 BRF2Q9HAW0 419 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 GIMAP4Q9NUV9 329 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 NMRK1Q9NWW6 199 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 TAS2R9Q9NYW1 312 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 XPR1Q9UBH6 696 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 RNF14Q9UBS8 474 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 SNX6Q9UNH7 406 aa12.54□□□□□ -0.4
SMARCA4-206ENST00000538456 GNG14A0A1W2PPG7 69 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 STX16-NPEPL1H3BU86 382 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 STX16O14662 325 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 TLX2O43763 284 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 CD5LO43866 347 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 PCDH7O60245 1069 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 SS18L1O75177 396 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 SMIM24O75264 130 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 OTCP00480 354 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 OPN1LWP04000 364 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 SOD3P08294 240 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 IDUAP35475 653 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 ETFDHQ16134 617 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 HIPK1Q86Z02 1210 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 CEP112Q8N8E3 955 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 FBXW5Q969U6 566 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 ZBED6CLQ96FA7 236 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 TACO1Q9BSH4 297 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 FANCFQ9NPI8 374 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 VPS29Q9UBQ0 182 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 MCM8Q9UJA3 840 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 ABCG2Q9UNQ0 655 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 VDAC3Q9Y277 283 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 AP4B1Q9Y6B7 739 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 CADP27708 2225 aa12.53□□□□□ -0.4
SMARCA4-206ENST00000538456 OVOL3O00110 214 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 PLOD3O60568 738 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 COQ9O75208 318 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 OR4F21O95013 312 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 C8BP07358 591 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 RPS17P08708 135 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 RBP1P09455 135 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 CHN1P15882 459 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 C2orf54Q08AI8 447 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 FAPQ12884 760 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 TRADDQ15628 312 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 TSC22D1Q15714 1073 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 DECR1Q16698 335 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 CHRFAM7AQ494W8 412 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 BEND4Q6ZU67 534 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 STK32CQ86UX6 486 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 SAMD14Q8IZD0 417 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 ZNF619Q8N2I2 560 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 C17orf53Q8N3J3 647 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 CDYL2Q8N8U2 506 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 OR10D3Q8NH80 312 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 LILRB1Q8NHL6 650 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 ZNF483Q8TF39 744 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 SLC9A6Q92581 669 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 NEUROG1Q92886 237 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 S100PBPQ96BU1 408 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 BBS4Q96RK4 519 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 EBPLQ9BY08 206 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 TBL1XR1Q9BZK7 514 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 SLCO5A1Q9H2Y9 848 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 RRAGDQ9NQL2 400 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 SLC35C2Q9NQQ7 365 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 FAM120CQ9NX05 1096 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 MCTS1Q9ULC4 181 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 TMCO1Q9UM00 188 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 LIPT1Q9Y234 373 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 RNF115Q9Y4L5 304 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 MAGED1Q9Y5V3 778 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.41
SMARCA4-206ENST00000538456 MANBAO00462 879 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms