RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 IL4I1Q96RQ9 567 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 NAP1L3Q99457 506 aaPredicted RBP2.63□□□□□ -1.99
CCDC7-208ENST00000537047 CARD6Q9BX69 1037 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 RSPO3Q9BXY4 272 aaPredicted RBP2.63□□□□□ -1.99
CCDC7-208ENST00000537047 DDX47Q9H0S4 455 aaKnown RBP2.63□□□□□ -1.99
CCDC7-208ENST00000537047 MIOXQ9UGB7 285 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 FAM153AQ9UHL3 310 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 GRIN2DO15399 1336 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 MACROD2A1Z1Q3 448 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 USP27XA6NNY8 438 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 TIMP1P01033 207 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 IGFBP1P08833 259 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-208ENST00000537047 GNSP15586 552 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 MAGEA4P43358 317 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 NUMBP49757 651 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 STK19P49842 368 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-208ENST00000537047 CCL11P51671 97 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 CNN1P51911 297 aaKnown RBP2.62□□□□□ -1.99
CCDC7-208ENST00000537047 CASP9P55211 416 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 RPL32P62910 135 aaKnown RBP2.62□□□□□ -1.99
CCDC7-208ENST00000537047 GFPT1Q06210 699 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-208ENST00000537047 RAB35Q15286 201 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 UFSP1Q6NVU6 142 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 P4HA3Q7Z4N8 544 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 ANKRD23Q86SG2 305 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 UNC45BQ8IWX7 931 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 PEX5LQ8IYB4 626 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 ZBTB44Q8NCP5 570 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 CNPY3Q9BT09 278 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 TEX13AQ9BXU3 409 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-208ENST00000537047 VCXQ9H320 206 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 PTGES2Q9H7Z7 377 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 DCAF13Q9NV06 445 aaKnown RBP2.62□□□□□ -1.99
CCDC7-208ENST00000537047 KLHDC2Q9Y2U9 406 aa2.62□□□□□ -1.99
CCDC7-208ENST00000537047 COL1A2P08123 1366 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 TLR4O00206 839 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 ABCD4O14678 606 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 HTATSF1O43719 755 aaKnown RBP2.61□□□□□ -1.99
CCDC7-208ENST00000537047 ANP32DO95626 131 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 ZNF823P16415 610 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 RFC2P35250 354 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 COPB2P35606 906 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 UBXN1Q04323 297 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 SRYQ05066 204 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 PKN2Q16513 984 aaKnown RBP2.61□□□□□ -1.99
CCDC7-208ENST00000537047 PARP6Q2NL67 630 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 HSD17B13Q7Z5P4 300 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-208ENST00000537047 YRDCQ86U90 279 aaKnown RBP2.61□□□□□ -1.99
CCDC7-208ENST00000537047 LRRC17Q8N6Y2 441 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 CCDC71LQ8N9Z2 235 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 PHYHIPQ92561 330 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 ZNF560Q96MR9 790 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 FAM114A2Q9NRY5 505 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 RBM28Q9NW13 759 aaKnown RBP2.61□□□□□ -1.99
CCDC7-208ENST00000537047 DUS2Q9NX74 493 aaKnown RBP2.61□□□□□ -1.99
CCDC7-208ENST00000537047 CWC25Q9NXE8 425 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-208ENST00000537047 FZR1Q9UM11 496 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 RLFQ13129 1914 aa2.61□□□□□ -1.99
CCDC7-208ENST00000537047 USP6P35125 1406 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 TRBV2A0A0J9YWF9 115 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 TRAF3IP2O43734 574 aaPredicted RBP2.6□□□□□ -1.99
CCDC7-208ENST00000537047 TBL1XO60907 577 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 GOSR1O95249 250 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 HNRNPFP52597 415 aaKnown RBP2.6□□□□□ -1.99
CCDC7-208ENST00000537047 KRT83P78385 493 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 EGFEM1PQ0D2K5 195 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 ZKSCAN8Q15776 578 aaPredicted RBP2.6□□□□□ -1.99
CCDC7-208ENST00000537047 DLEU7Q6UYE1 221 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 GOLGA7Q7Z5G4 137 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 PHF10Q8WUB8 498 aaKnown RBP2.6□□□□□ -1.99
CCDC7-208ENST00000537047 RDH5Q92781 318 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 CCDC43Q96MW1 224 aaKnown RBP2.6□□□□□ -1.99
CCDC7-208ENST00000537047 CBWD1Q9BRT8 395 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 NXF3Q9H4D5 531 aaKnown RBP2.6□□□□□ -1.99
CCDC7-208ENST00000537047 PRMT8Q9NR22 394 aaPredicted RBP2.6□□□□□ -1.99
CCDC7-208ENST00000537047 STARD5Q9NSY2 213 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 BCAP29Q9UHQ4 241 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 CACNG2Q9Y698 323 aa2.6□□□□□ -1.99
CCDC7-208ENST00000537047 PTPRUQ92729 1446 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 TRBV6-6A0A0A6YYG2 114 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 DHRS7CA6NNS2 312 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 STK17BO94768 372 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 PGK2P07205 417 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 HMOX1P09601 288 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 SLC35G4P0C7Q5 338 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 GABRR1P24046 479 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 EMDP50402 254 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 HERVK_113P63132 956 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 ERVK-8P63133 956 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 DPYSQ14117 519 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 C16orf72Q14CZ0 275 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 CYP51A1Q16850 503 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 C2orf76Q3KRA6 126 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 DCST2Q5T1A1 773 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 GPR157Q5UAW9 335 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 SLX4IPQ5VYV7 408 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 OR5M10Q6IEU7 315 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 SULT1C3Q6IMI6 304 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 PNCKQ6P2M8 343 aa2.59□□□□□ -1.99
CCDC7-208ENST00000537047 ZFP2Q6ZN57 461 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms