RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 COX10Q12887 443 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 C3orf38Q5JPI3 329 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 KIAA1324Q6UXG2 1013 aaKnown RBP18.12■□□□□ 0.49
CAPN1-226ENST00000533820 ASB18Q6ZVZ8 466 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 KLBQ86Z14 1044 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 OTOL1A6NHN0 477 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-226ENST00000533820 PIP5K1CO60331 668 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 LGI1O95970 557 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 TRHRP34981 398 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-226ENST00000533820 TRIM23P36406 574 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 POLR2GP62487 172 aaKnown RBP eCLIP18.12■□□□□ 0.49
CAPN1-226ENST00000533820 BNC1Q01954 994 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 ZNF628Q5EBL2 1059 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 GARNL3Q5VVW2 1013 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 SMARCD3Q6STE5 483 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 HSDL2Q6YN16 418 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 QSOX2Q6ZRP7 698 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 RIT1Q92963 219 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 SENP5Q96HI0 755 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-226ENST00000533820 PRRC1Q96M27 445 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 VCANP13611 3396 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 UBXN7O94888 489 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 CEBPBP17676 345 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 FUT1P19526 365 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 NTSP30990 170 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 PPM1AP35813 382 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 SLC1A3P43003 542 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 RPS5P46782 204 aaKnown RBP18.12■□□□□ 0.49
CAPN1-226ENST00000533820 BTN1A1Q13410 526 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 EFR3AQ14156 821 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 TMEM145Q8NBT3 493 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 SLC22A8Q8TCC7 542 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 C12orf66Q96MD2 445 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 QRFPRQ96P65 431 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 SLC38A2Q96QD8 506 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.12■□□□□ 0.49
CAPN1-226ENST00000533820 RHBGQ9H310 441 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 MED20Q9H944 212 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 SCML1Q9UN30 329 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 KCNK6Q9Y257 313 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 HSPB11Q9Y547 144 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 IGLON5A6NGN9 336 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 SOCS6O14544 535 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 FCMRO60667 390 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 ACADMP11310 421 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 EPCAMP16422 314 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 TALDO1P37837 337 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 CSTF1Q05048 431 aaKnown RBP18.11■□□□□ 0.49
CAPN1-226ENST00000533820 LTB4RQ15722 352 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 WSCD2Q2TBF2 565 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 OR5K2Q8NHB8 316 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 CXorf40AQ8TE69 158 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 SPRYD4Q8WW59 207 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-226ENST00000533820 CNRIP1Q96F85 164 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-226ENST00000533820 ZNF514Q96K75 400 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-226ENST00000533820 SECISBP2Q96T21 854 aaKnown RBP18.11■□□□□ 0.49
CAPN1-226ENST00000533820 MCOLN1Q9GZU1 580 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 C6orf106Q9H6K1 298 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-226ENST00000533820 DIABLOQ9NR28 239 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 OR52A4PA6NMU1 304 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 PCDH8O95206 1070 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 SLC35G4P0C7Q5 338 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 MC3RP41968 323 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 TAS2R38P59533 333 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 CSNK1G2P78368 415 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 RAB40BQ12829 278 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 GALEQ14376 348 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 RNASE12Q5GAN4 147 aaKnown RBP18.11■□□□□ 0.49
CAPN1-226ENST00000533820 SPRED2Q7Z698 418 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 OR8H1Q8NGG4 311 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 OR51G2Q8NGK0 314 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 OR4Q3Q8NH05 313 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 OR8D1Q8WZ84 308 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 AP3S1Q92572 193 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 LRIG1Q96JA1 1093 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 HDHD2Q9H0R4 259 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 GALNT9Q9HCQ5 603 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 EIF3KQ9UBQ5 218 aaKnown RBP18.11■□□□□ 0.49
CAPN1-226ENST00000533820 CLEC4AQ9UMR7 237 aa18.11■□□□□ 0.49
CAPN1-226ENST00000533820 A0A1W2PPV9 198 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 A0A1W2PR48 441 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 CISD3P0C7P0 127 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 KHKP50053 298 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 STXBP1P61764 594 aaKnown RBP18.1■□□□□ 0.49
CAPN1-226ENST00000533820 TPBGQ13641 420 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 CFAP77Q6ZQR2 320 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 NRMQ8IXM6 262 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 GHDCQ8N2G8 530 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 SMAP2Q8WU79 429 aaPredicted RBP18.1■□□□□ 0.49
CAPN1-226ENST00000533820 UPRTQ96BW1 309 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 SIPA1Q96FS4 1042 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 FCRL4Q96PJ5 515 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 DDX31Q9H8H2 851 aaKnown RBP18.1■□□□□ 0.49
CAPN1-226ENST00000533820 ISG20L2Q9H9L3 353 aaKnown RBP18.1■□□□□ 0.49
CAPN1-226ENST00000533820 MCUBQ9NWR8 336 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 PLEKHM1Q9Y4G2 1056 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 IGKV1-8A0A0C4DH67 115 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 CXorf51AA0A1B0GTR3 108 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 C17orf113A0A1B0GUU1 675 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 CERS1P27544 350 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms