RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 RTP3Q9BQQ7 232 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 PBX4Q9BYU1 374 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 EVA1AQ9H8M9 152 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 PRSS16Q9NQE7 514 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 POT1Q9NUX5 634 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 MYO5AQ9Y4I1 1855 aaKnown RBP13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 PLATP00750 562 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 ADH7P40394 386 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 EPHA4P54764 986 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 SNU13P55769 128 aaKnown RBP13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 ZNF765Q7L2R6 523 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 OR8H3Q8N146 312 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 OR2A12Q8NGT7 310 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 MUS81Q96NY9 551 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 SLC39A1Q9NY26 324 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 ENPP4Q9Y6X5 453 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 ISPDA4D126 451 aa13.96□□□□□ -0.18
PCDHA9-202ENST00000532602 MEGF11A6BM72 1044 aa13.96□□□□□ -0.18
PCDHA9-202ENST00000532602 SORBS2O94875 1100 aaKnown RBP13.96□□□□□ -0.18
PCDHA9-202ENST00000532602 SLITRK5O94991 958 aa13.96□□□□□ -0.18
PCDHA9-202ENST00000532602 F3P13726 295 aa13.96□□□□□ -0.18
PCDHA9-202ENST00000532602 AMY2BP19961 511 aa13.96□□□□□ -0.18
PCDHA9-202ENST00000532602 DAP3P51398 398 aaKnown RBP13.96□□□□□ -0.18
PCDHA9-202ENST00000532602 PSMA6P60900 246 aaKnown RBP13.96□□□□□ -0.18
PCDHA9-202ENST00000532602 SCGB1C1Q8TD33 95 aa13.96□□□□□ -0.18
PCDHA9-202ENST00000532602 TMEM168Q9H0V1 697 aa13.96□□□□□ -0.18
PCDHA9-202ENST00000532602 RBMX2Q9Y388 322 aaKnown RBP13.96□□□□□ -0.18
PCDHA9-202ENST00000532602 YES1P07947 543 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 DDCP20711 480 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 SFTPDP35247 375 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 GK3PQ14409 553 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 HSF5Q4G112 596 aaPredicted RBP13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 OPN5Q6U736 354 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 LHFPL3Q86UP9 236 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 ZNF420Q8TAQ5 688 aaPredicted RBP13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 ARRDC3Q96B67 414 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 FAM86C1Q9NVL1 165 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 COPZ2Q9P299 210 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 BTNL2Q9UIR0 455 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 SLC35A3Q9Y2D2 325 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 AKAP11Q9UKA4 1901 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 J3QRK9 145 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 YKT6O15498 198 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 TRA2BP62995 288 aaKnown RBP13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 TAP2Q03519 686 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 FAM205BPQ63HN1 556 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 RBM24Q9BX46 236 aaKnown RBP13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 MEPEQ9NQ76 525 aaPredicted RBP13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 GPR160Q9UJ42 338 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 DCNP07585 359 aaKnown RBP13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 IFNGR1P15260 489 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 MAP4K2Q12851 820 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 RSU1Q15404 277 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 TMEM240Q5SV17 173 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 C6orf141Q5SZD1 244 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 OGFRL1Q5TC84 451 aaPredicted RBP13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 OR9A4Q8NGU2 314 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 CUEDC1Q9NWM3 386 aaPredicted RBP13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 ABCG2Q9UNQ0 655 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 GFRA2O00451 464 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 HTR3AP46098 478 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 LIPKQ5VXJ0 399 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 NAGSQ8N159 534 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 OR13J1Q8NGT2 312 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 SYT11Q9BT88 431 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 SH3BGRL2Q9UJC5 107 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 LTBP4Q8N2S1 1624 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 ZNF850A8MQ14 1090 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 HSD17B7P56937 341 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 ZNF45Q02386 682 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 SPHARQ15513 63 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 NRMQ8IXM6 262 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 VN1R2Q8NFZ6 395 aa13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 MRPL38Q96DV4 380 aaKnown RBP13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 CXXC1Q9P0U4 656 aaPredicted RBP13.95□□□□□ -0.18
PCDHA9-202ENST00000532602 LOC102723532A0A0G2JNH3 316 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 OR6C70A6NIJ9 312 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 C1orf105O95561 183 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 ICAM2P13598 275 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 APLNRP35414 380 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 MZT1Q08AG7 82 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 GALNT6Q8NCL4 622 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 OR4K13Q8NH42 304 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 GSTO2Q9H4Y5 243 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 H3BML4 177 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 UCHL1P09936 223 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 AIMP2Q13155 320 aaKnown RBP13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 TDHQ8IZJ6 230 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 ZNF619Q8N2I2 560 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 NETO1Q8TDF5 533 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 DKK3Q9UBP4 350 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 LOC285095A0A1B0GVY8 99 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 H3BSA7 217 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 PPP6CO00743 305 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 CASC3O15234 703 aaKnown RBP13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 GGT1P19440 569 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 MSX1P28360 303 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 MAT1AQ00266 395 aaKnown RBP13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 FAM76BQ5HYJ3 339 aa13.94□□□□□ -0.18
PCDHA9-202ENST00000532602 RAB12Q6IQ22 244 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms