RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 EMC3Q9P0I2 261 aa10.65□□□□□ -0.71
PTPRK-221ENST00000532331 KLHL21Q9UJP4 597 aa10.65□□□□□ -0.71
PTPRK-221ENST00000532331 PCDHGA3Q9Y5H0 932 aa10.65□□□□□ -0.71
PTPRK-221ENST00000532331 TEX13DA0A0J9YY54 714 aaPredicted RBP10.64□□□□□ -0.71
PTPRK-221ENST00000532331 hCG_1807616A0A1W2PRN6 198 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 SLC22A31A6NKX4 558 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 G3V2L1 256 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 GGT1P19440 569 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 VAMP1P23763 118 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 CEACAM7Q14002 265 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 CTSL3PQ5NE16 218 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 GRAMD2AQ8IUY3 354 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 DTWD2Q8NBA8 298 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 GRPEL2Q8TAA5 225 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 SPRYD4Q8WW59 207 aaPredicted RBP10.64□□□□□ -0.71
PTPRK-221ENST00000532331 CCDC115Q96NT0 180 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 SECISBP2Q96T21 854 aaKnown RBP10.64□□□□□ -0.71
PTPRK-221ENST00000532331 SMURF1Q9HCE7 757 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 LOXL2Q9Y4K0 774 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 RNF215Q9Y6U7 377 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 METTL12A8MUP2 240 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 S100A6P06703 90 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 ZDHHC11BP0C7U3 371 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 UBL4AP11441 157 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 ADRA1AP35348 466 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 HTR4Q13639 388 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 C6orf141Q5SZD1 244 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 VASH1Q7L8A9 365 aaPredicted RBP10.64□□□□□ -0.71
PTPRK-221ENST00000532331 RCBTB1Q8NDN9 531 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 OR8K3Q8NH51 312 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 SORBS1Q9BX66 1292 aaKnown RBP10.64□□□□□ -0.71
PTPRK-221ENST00000532331 IL21Q9HBE4 155 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 SRA1Q9HD15 236 aaKnown RBP10.64□□□□□ -0.71
PTPRK-221ENST00000532331 VNN3Q9NY84 501 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 SCP2D1Q9UJQ7 156 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 RBMX2Q9Y388 322 aaKnown RBP10.64□□□□□ -0.71
PTPRK-221ENST00000532331 DLGAP1O14490 977 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 ZNF749O43361 778 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 GPR75O95800 540 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 BMP4P12644 408 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 DLSTP36957 453 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 NAA10P41227 235 aaPredicted RBP10.64□□□□□ -0.71
PTPRK-221ENST00000532331 AP2S1P53680 142 aaPredicted RBP10.64□□□□□ -0.71
PTPRK-221ENST00000532331 SIGLEC14Q08ET2 396 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 HSD17B12Q53GQ0 312 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 AFMIDQ63HM1 303 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 ZNF619Q8N2I2 560 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 NINJ1Q92982 152 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 NT5C3BQ969T7 300 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 TESCQ96BS2 214 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 BORCS8Q96FH0 119 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 PGAM5Q96HS1 289 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 ENAMQ9NRM1 1142 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 ATXN7L1Q9ULK2 861 aaPredicted RBP10.64□□□□□ -0.71
PTPRK-221ENST00000532331 BAIAP2Q9UQB8 552 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 C4orf47A7E2U8 309 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 HSD17B1P14061 328 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 IGFBP6P24592 240 aaPredicted RBP10.64□□□□□ -0.71
PTPRK-221ENST00000532331 NPRL3Q12980 569 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 HNRNPA0Q13151 305 aaKnown RBP10.64□□□□□ -0.71
PTPRK-221ENST00000532331 ADOQ96SZ5 270 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 ZNF224Q9NZL3 707 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 DHDHQ9UQ10 334 aa10.64□□□□□ -0.71
PTPRK-221ENST00000532331 KLRC4-KLRK1H3BQV0 150 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 YY2O15391 372 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 PLRG1O43660 514 aaKnown RBP10.63□□□□□ -0.71
PTPRK-221ENST00000532331 FMO6PO60774 539 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 RFPL3O75679 317 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 IL32P24001 234 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 HLA-BQ31612 363 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 BCL7AQ4VC05 210 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 FBXL6Q8N531 539 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 THAP6Q8TBB0 222 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 WACQ9BTA9 647 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 PCED1AQ9H1Q7 454 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 RXFP3Q9NSD7 469 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 FARSAQ9Y285 508 aaKnown RBP10.63□□□□□ -0.71
PTPRK-221ENST00000532331 A0A1B0GX78 115 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 ANTXRLA6NF34 631 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 LRRN3E7EW58 273 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 FGF4P08620 206 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 DCKP27707 260 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 ACTA2P62736 377 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 ACTG2P63267 376 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 GPR19Q15760 415 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 LETMD1Q6P1Q0 360 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 ZNF420Q8TAQ5 688 aaPredicted RBP10.63□□□□□ -0.71
PTPRK-221ENST00000532331 KCNN1Q92952 543 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 SLC7A6OSQ96CW6 309 aaPredicted RBP10.63□□□□□ -0.71
PTPRK-221ENST00000532331 ZNF451Q9Y4E5 1061 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 MTCH2Q9Y6C9 303 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 GGT3PA6NGU5 568 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 DNAJB5O75953 348 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 SCGB1D2O95969 90 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 FESP07332 822 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 GCH1P30793 250 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 MAGEA8P43361 318 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 MOGQ16653 247 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 GARNL3Q5VVW2 1013 aa10.63□□□□□ -0.71
PTPRK-221ENST00000532331 TMED4Q7Z7H5 227 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms