RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 ELOCQ15369 112 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 GPR68Q15743 365 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 LPAL2Q16609 132 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 ZNF674Q2M3X9 581 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 SMU1Q2TAY7 513 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 HKDC1Q2TB90 917 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 C2orf76Q3KRA6 126 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 FAM174BQ3ZCQ3 159 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 PLK5Q496M5 336 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 SPIN4Q56A73 249 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 TOR1AIP1Q5JTV8 583 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 TCTE1Q5JU00 501 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 SPANXN4Q5MJ08 99 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 C1orf146Q5VVC0 180 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 LYSMD4Q5XG99 296 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 PMS2CLQ68D20 193 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 DGAT2L7PQ6IED9 249 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 OR4F3Q6IEY1 312 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 ZNF425Q6IV72 752 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 ANKRD26P1Q6NSI1 321 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 CYB5D1Q6P9G0 228 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 SLC2A7Q6PXP3 512 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 FIGLAQ6QHK4 219 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 TMEM26Q6ZUK4 368 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 COMMD6Q7Z4G1 85 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 DHDDSQ86SQ9 333 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 ADCK1Q86TW2 530 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 ANKRD46Q86W74 232 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 PAQR7Q86WK9 346 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 GKN2Q86XP6 184 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 HPS6Q86YV9 775 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 SYT12Q8IV01 421 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 C1orf210Q8IVY1 113 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 MAML2Q8IZL2 1156 aaPredicted RBP3.91□□□□□ -1.78
CD44-226ENST00000527889 PGAM4Q8N0Y7 254 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 MMP21Q8N119 569 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 ARHGAP24Q8N264 748 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 METTL4Q8N3J2 472 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 OR7A2PQ8NGA2 310 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 OR4K1Q8NGD4 311 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 MBD3L2Q8NHZ7 208 aaPredicted RBP3.91□□□□□ -1.78
CD44-226ENST00000527889 FLVCR1-AS1Q8TAF5 88 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 POC1BQ8TC44 478 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 PHF3Q92576 2039 aaKnown RBP3.91□□□□□ -1.78
CD44-226ENST00000527889 PIGKQ92643 395 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 PCSK5Q92824 1860 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 UBE2E3Q969T4 207 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 LRRC58Q96CX6 371 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 KTI12Q96EK9 354 aaPredicted RBP3.91□□□□□ -1.78
CD44-226ENST00000527889 FCRL1Q96LA6 429 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 FCRL4Q96PJ5 515 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 OR2A14Q96R47 310 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 F2RL3Q96RI0 385 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 SERPINI1Q99574 410 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 ZBTB18Q99592 522 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 MS4A8Q9BY19 250 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 CEP295Q9C0D2 2601 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 RHBGQ9H310 441 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 KLHL31Q9H511 634 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 CLMPQ9H6B4 373 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 COPS7BQ9H9Q2 264 aaPredicted RBP3.91□□□□□ -1.78
CD44-226ENST00000527889 IL21RQ9HBE5 538 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 RPRD1BQ9NQG5 326 aaKnown RBP3.91□□□□□ -1.78
CD44-226ENST00000527889 TMEM74BQ9NUR3 256 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 POT1Q9NUX5 634 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 TMEM184CQ9NVA4 438 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 ASIC5Q9NY37 505 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 COQ3Q9NZJ6 369 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 ADA2Q9NZK5 511 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 OR6C2Q9NZP2 312 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 MBD2Q9UBB5 411 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 SPASTQ9UBP0 616 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 SLC7A8Q9UHI5 535 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 LEF1Q9UJU2 399 aaPredicted RBP3.91□□□□□ -1.78
CD44-226ENST00000527889 ANGPTL2Q9UKU9 493 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 C15orf41Q9Y2V0 281 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 CHTOPQ9Y3Y2 248 aaKnown RBP3.91□□□□□ -1.78
CD44-226ENST00000527889 SESN1Q9Y6P5 492 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 NAV3Q8IVL0 2385 aa3.91□□□□□ -1.78
CD44-226ENST00000527889 POLQO75417 2590 aa3.9□□□□□ -1.78
CD44-226ENST00000527889 LOC105369274A0A096LPK9 316 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 LOC102723532A0A0G2JNH3 316 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 A0A0J9YVX5 310 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 A0A0J9YY10 115 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 A0A1B0GTW7 788 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 A0A1W2PP18 115 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 A0A1W2PRX2 142 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 OR5K3A6NET4 321 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 C9orf118A6NHY6 69 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 SAC3D1A6NKF1 404 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 OR5K4A6NMS3 321 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 PATE3B3GLJ2 98 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 LMO7DNF2Z398 122 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 ETV2O00321 342 aaPredicted RBP3.9□□□□□ -1.79
CD44-226ENST00000527889 FOXE1O00358 373 aaPredicted RBP3.9□□□□□ -1.79
CD44-226ENST00000527889 NME4O00746 187 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 PLPP1O14494 284 aa3.9□□□□□ -1.79
CD44-226ENST00000527889 SCAMP2O15127 329 aaKnown RBP3.9□□□□□ -1.79
CD44-226ENST00000527889 CASC3O15234 703 aaKnown RBP3.9□□□□□ -1.79
CD44-226ENST00000527889 NVLO15381 856 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms