RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 PHF1O43189 567 aaPredicted RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 BCL2L11O43521 198 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 SCRG1O75711 98 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 SEC14L2O76054 403 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 BEST1O76090 585 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 KIAA0754O94854 1291 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 LY6G6DO95868 133 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CD160O95971 181 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 IGSF6O95976 241 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 HPP00738 406 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 FYNP06241 537 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 UBL4AP11441 157 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 FDPSP14324 419 aaKnown RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 GABRA1P14867 456 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 VCLP18206 1134 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 TNNI1P19237 187 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 FOXN2P32314 431 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 HNF4AP41235 474 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CD86P42081 329 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 PRCPP42785 496 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 PGFP49763 221 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CCL11P51671 97 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 OR1D5P58170 312 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CD81P60033 236 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 MYL6P60660 151 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 RPS24P62847 133 aaKnown RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 CDK3Q00526 305 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 RELAQ04206 551 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 GAGE2BQ13066 116 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CHAF1BQ13112 559 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 BIRC3Q13489 604 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 BIRC2Q13490 618 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 FRG1Q14331 258 aaKnown RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 SQLEQ14534 574 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 GOLGA7BQ2TAP0 167 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CHRFAM7AQ494W8 412 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 GAGE2EQ4V326 116 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 PYCR3Q53H96 274 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 FASTKD1Q53R41 847 aaKnown RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 C2CD6Q53TS8 623 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 ZNF789Q5FWF6 425 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 PLEKHS1Q5SXH7 462 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 RIPPLY2Q5TAB7 128 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 LIPNQ5VXI9 398 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 ZDHHC20Q5W0Z9 365 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 TMEM198Q66K66 360 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 KRT39Q6A163 491 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 FAAH2Q6GMR7 532 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 OR6B2Q6IFH4 312 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 GAGE2AQ6NT46 116 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 H3F3CQ6NXT2 135 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 PNCKQ6P2M8 343 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 PRMT9Q6P2P2 845 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 MYO7BQ6PIF6 2116 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CYP20A1Q6UW02 462 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 UGT2A3Q6UWM9 527 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 ENPP7Q6UWV6 458 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 LRRC31Q6UY01 552 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CFAP77Q6ZQR2 320 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 DNM1P46Q6ZS02 220 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CLEC17AQ6ZS10 378 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 GSTA5Q7RTV2 222 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 GPBP1Q86WP2 473 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CACUL1Q86Y37 369 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 SLC13A5Q86YT5 568 aaPredicted RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 GALNT13Q8IUC8 556 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 LRRC49Q8IUZ0 686 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CCDC65Q8IXS2 484 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 APCDD1Q8J025 514 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 UMODL1-AS1Q8N2C9 162 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 GUF1Q8N442 669 aaKnown RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 CARNMT1Q8N4J0 409 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 MAPKAPK5-AS1Q8N8E1 139 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 SYT14Q8NB59 555 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 TMEM178AQ8NBL3 297 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 WFDC11Q8NEX6 87 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 OR5B17Q8NGF7 314 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 EXD1Q8NHP7 514 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 GOT1L1Q8NHS2 421 aaPredicted RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 FAM57AQ8TBR7 257 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 METTL6Q8TCB7 284 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 SLC37A2Q8TED4 501 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 GTF3AQ92664 365 aaKnown RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 NTAN1Q96AB6 310 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 DNAJC19Q96DA6 116 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 SAAL1Q96ER3 474 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 DTD2Q96FN9 168 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 NSMCE3Q96MG7 304 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 ZNF396Q96N95 335 aaPredicted RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 ZNF582Q96NG8 517 aaPredicted RBP1.35□□□□□ -2.19
CD44-212ENST00000524922 ZNF285Q96NJ3 590 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 GBP5Q96PP8 586 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 OR6C1Q96RD1 312 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 TAAR6Q96RI8 345 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 PSMB7Q99436 277 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 PIGQQ9BRB3 760 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 CBWD1Q9BRT8 395 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 TMEM121Q9BTD3 319 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 MED10Q9BTT4 135 aa1.35□□□□□ -2.19
CD44-212ENST00000524922 OR10A4Q9H209 315 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms