RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 RRM2BQ7LG56 351 aa12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 CYP4Z2PQ8N1L4 340 aa12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 CA13Q8N1Q1 262 aa12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 TSTD1Q8NFU3 115 aa12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 FAM174AQ8TBP5 190 aa12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 PIK3R3Q92569 461 aa12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 TMEM80Q96HE8 168 aa12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 OPALINQ96PE5 141 aa12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 PRR14Q9BWN1 585 aa12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 SEMA6CQ9H3T2 930 aa12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 CLCA2Q9UQC9 943 aa12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 LSM2Q9Y333 95 aaKnown RBP12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 CHST2Q9Y4C5 530 aa12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 MN1Q10571 1320 aaPredicted RBP12.85□□□□□ -0.35
LDLRAD3-202ENST00000524419 CYR61O00622 381 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 LDB3O75112 727 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 OR5F1O95221 314 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 SRFP11831 508 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 TYRP1P17643 537 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 ENDOUP21128 410 aaKnown RBP12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 CDK5Q00535 292 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 SMAD4Q13485 552 aaKnown RBP12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 SSX1Q16384 188 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 TRMT12Q53H54 448 aaKnown RBP12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 CLIP4Q8N3C7 705 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 POC5Q8NA72 575 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 OR5T3Q8NGG3 340 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 SLC6A18Q96N87 628 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 MCHR1Q99705 422 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 GPA33Q99795 319 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 PIGUQ9H490 435 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 SIAEQ9HAT2 523 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 ADAP2Q9NPF8 381 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 SLC2A4RGQ9NR83 387 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 CRNNQ9UBG3 495 aaPredicted RBP12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 TMEM131Q92545 1883 aa12.84□□□□□ -0.35
LDLRAD3-202ENST00000524419 MBTPS2O43462 519 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 TLX2O43763 284 aaPredicted RBP12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 PRKYO43930 277 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 PLOD3O60568 738 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 THBS1P07996 1170 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 IFI6P09912 130 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 GIPRP48546 466 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 RAB38P57729 211 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 CD300CQ08708 224 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 TSPAN31Q12999 210 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 SLC13A2Q13183 592 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 SLC25A30Q5SVS4 291 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 CCDC190Q86UF4 302 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 KIF18BQ86Y91 864 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 FAM26EQ8N5C1 309 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 CDRT4Q8N9R6 151 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 TMEM52Q8NDY8 209 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 SIMC1Q8NDZ2 872 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 HPS1Q92902 700 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 LRRC61Q9BV99 259 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 MND1Q9BWT6 205 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 IL21RQ9HBE5 538 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 STARD5Q9NSY2 213 aa12.83□□□□□ -0.35
LDLRAD3-202ENST00000524419 CHURC1-FNTBB4DL54 471 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 SGK494L7N484 410 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 GPX5O75715 221 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 UBXN7O94888 489 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 CHRNB1P11230 501 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 ST6GAL1P15907 406 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 TRHRP34981 398 aaPredicted RBP12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 TMED10P49755 219 aaKnown RBP12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 HOXC5Q00444 222 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 DUSP8Q13202 625 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 DECR1Q16698 335 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 SPANXN2Q5MJ10 180 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 DCST2Q5T1A1 773 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 ZCCHC12Q6PEW1 402 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 RASSF6Q6ZTQ3 369 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 PRICKLE2Q7Z3G6 844 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 ZNF438Q7Z4V0 828 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 MEX3DQ86XN8 651 aaKnown RBP12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 ZNF619Q8N2I2 560 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 COX18Q8N8Q8 333 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 C19orf47Q8N9M1 422 aaKnown RBP12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 FAM83FQ8NEG4 500 aaPredicted RBP12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 DOK4Q8TEW6 326 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 ACOT11Q8WXI4 607 aaPredicted RBP12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 SLC41A3Q96GZ6 507 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 FAM46AQ96IP4 442 aaKnown RBP12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 STACQ99469 402 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 SDF2Q99470 211 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 CDX2Q99626 313 aaPredicted RBP12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 PRRG3Q9BZD7 231 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 ZNF350Q9GZX5 532 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 NUAK2Q9H093 628 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 EGLN3Q9H6Z9 239 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 HHATLQ9HCP6 504 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 DUSP22Q9NRW4 184 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 QPCTLQ9NXS2 382 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 SEC14L4Q9UDX3 406 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 SATB2Q9UPW6 733 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 PCDHGB6Q9Y5F9 930 aa12.83□□□□□ -0.36
LDLRAD3-202ENST00000524419 ZNF217O75362 1048 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms