RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 FAM57AQ8TBR7 257 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 NEURL3Q96EH8 262 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 CHMP6Q96FZ7 201 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 OR7D2Q96RA2 312 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 HOXD1Q9GZZ0 328 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 DEFB127Q9H1M4 99 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 LDAHQ9H6V9 325 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 NPHS2Q9NP85 383 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 EXD2Q9NVH0 621 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 FASNP49327 2511 aaKnown RBP11.47□□□□□ -0.57
VEGFA-225ENST00000523950 NBASA2RRP1 2371 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 POLEQ07864 2286 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 NCKAP5O14513 1909 aa11.47□□□□□ -0.57
VEGFA-225ENST00000523950 ALG1L2C9J202 215 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 RFXANKO14593 260 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 GNB5O14775 395 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 WISP2O76076 250 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 AGFG2O95081 481 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 UTS2O95399 124 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 IGKV1D-16P01601 117 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 GUSBP08236 651 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 RFPL3SP0C7P2 107 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 ZCCHC18P0CG32 403 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 ATP6V1C1P21283 382 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 TBXA2RP21731 343 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 MDH1P40925 334 aaKnown RBP11.46□□□□□ -0.57
VEGFA-225ENST00000523950 ZFP36L2P47974 494 aaKnown RBP11.46□□□□□ -0.57
VEGFA-225ENST00000523950 RFX3P48380 749 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 KHKP50053 298 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 GAS1P54826 345 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 GTF3C1Q12789 2109 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 RCAN2Q14206 197 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 DCST2Q5T1A1 773 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 MISPQ8IVT2 679 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 WDSUB1Q8N9V3 476 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 CHDHQ8NE62 594 aaPredicted RBP11.46□□□□□ -0.57
VEGFA-225ENST00000523950 FBXO30Q8TB52 745 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 OIT3Q8WWZ8 545 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 CDS1Q92903 461 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 SARAFQ96BY9 339 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 ITCHQ96J02 903 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 GNRHR2Q96P88 292 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 SLC35A5Q9BS91 424 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 YIPF4Q9BSR8 244 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 TBL1XR1Q9BZK7 514 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 GALNT9Q9HCQ5 603 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 UBQLN4Q9NRR5 601 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 SUCOQ9UBS9 1254 aaKnown RBP11.46□□□□□ -0.57
VEGFA-225ENST00000523950 DCTN4Q9UJW0 460 aa11.46□□□□□ -0.57
VEGFA-225ENST00000523950 MRPS18CQ9Y3D5 142 aaKnown RBP11.46□□□□□ -0.57
VEGFA-225ENST00000523950 IGLV3-32A0A0A0MS00 114 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 TRGV8A0A0C4DH27 118 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 A0A1W2PQD3 144 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 CCDC154A6NI56 674 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 C9JVG2 144 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 EBAG9O00559 213 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 SCDO00767 359 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 KRT75O95678 551 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 VIMP08670 466 aaKnown RBP11.45□□□□□ -0.58
VEGFA-225ENST00000523950 SRD5A2P31213 254 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 GCKP35557 465 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 CHI3L1P36222 383 aaPredicted RBP11.45□□□□□ -0.58
VEGFA-225ENST00000523950 TRPC1P48995 793 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 HSF1Q00613 529 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 GUCY1A3Q02108 690 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 SRSF1Q07955 248 aaKnown RBP eCLIP11.45□□□□□ -0.581e-7■■□□□ 13.3
VEGFA-225ENST00000523950 C17orf67Q0P5P2 114 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 GANABQ14697 944 aaKnown RBP11.45□□□□□ -0.58
VEGFA-225ENST00000523950 NHSL2Q5HYW2 709 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 ATAD3BQ5T9A4 648 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 C1QL3Q5VWW1 255 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 FIGNL1Q6PIW4 674 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 BLOC1S3Q6QNY0 202 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 ZNF621Q6ZSS3 439 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 FGD2Q7Z6J4 655 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 ZNF527Q8NB42 609 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 OR9I1Q8NGQ6 314 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 RFWD2Q8NHY2 731 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 NEIL3Q8TAT5 605 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 SSC4DQ8WTU2 575 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 OR2B2Q9GZK3 357 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 TP63Q9H3D4 680 aaPredicted RBP11.45□□□□□ -0.58
VEGFA-225ENST00000523950 EXO5Q9H790 373 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 SERHLQ9NQF3 203 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 POLE3Q9NRF9 147 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 PPP4R1LQ9P1A2 415 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 ERRFI1Q9UJM3 462 aaPredicted RBP11.45□□□□□ -0.58
VEGFA-225ENST00000523950 LIPGQ9Y5X9 500 aa11.45□□□□□ -0.58
VEGFA-225ENST00000523950 UBR5O95071 2799 aaPredicted RBP11.45□□□□□ -0.58
VEGFA-225ENST00000523950 A0A0G2JND7 137 aa11.44□□□□□ -0.58
VEGFA-225ENST00000523950 WIPF3A6NGB9 483 aa11.44□□□□□ -0.58
VEGFA-225ENST00000523950 FIGNL2A6NMB9 653 aa11.44□□□□□ -0.58
VEGFA-225ENST00000523950 ADAM10O14672 748 aa11.44□□□□□ -0.58
VEGFA-225ENST00000523950 LRRTM2O43300 516 aa11.44□□□□□ -0.58
VEGFA-225ENST00000523950 SCO2O43819 266 aa11.44□□□□□ -0.58
VEGFA-225ENST00000523950 SEMA7AO75326 666 aa11.44□□□□□ -0.58
VEGFA-225ENST00000523950 TRAPPC6AO75865 159 aa11.44□□□□□ -0.58
VEGFA-225ENST00000523950 PDE9AO76083 593 aa11.44□□□□□ -0.58
VEGFA-225ENST00000523950 ANP32DO95626 131 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms