RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 BOKQ9UMX3 212 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 LAMP3Q9UQV4 416 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 IGHV4-30-2A0A087WSY4 118 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 A0A1W2PNV4 684 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 TCRBV9S1A1TA0A576 114 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 GOLGA6L10A6NI86 522 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 FAM159BA6NKW6 160 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 GOLGA8MH3BSY2 632 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 HS3ST1O14792 307 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 AKAP10O43572 662 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 OR1F1O43749 312 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 RRP9O43818 475 aaKnown RBP5.96□□□□□ -1.46
SDCBP-210ENST00000522843 TMCC2O75069 709 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 AVILO75366 819 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 ETHE1O95571 254 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 SOD3P08294 240 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 NPPBP16860 134 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 PGAM1P18669 254 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 IGFBP5P24593 272 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 ADRA1DP25100 572 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 SSTR1P30872 391 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 STX2P32856 288 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 LSP1P33241 339 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 IDUAP35475 653 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 UGT2B10P36537 528 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 CDKN1AP38936 164 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 CD79BP40259 229 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 PCYT1AP49585 367 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 TTPAP49638 278 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 NAGLUP54802 743 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 C21orf58P58505 322 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 PRAMEP78395 509 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 ASPHQ12797 758 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 BMPR2Q13873 1038 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 FASTKD3Q14CZ7 662 aaKnown RBP5.96□□□□□ -1.46
SDCBP-210ENST00000522843 MPEG1Q2M385 716 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 TMEM249Q2WGJ8 235 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 TTMPQ5BVD1 217 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 AARS2Q5JTZ9 985 aaKnown RBP5.96□□□□□ -1.46
SDCBP-210ENST00000522843 PCID2Q5JVF3 399 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 SPANXN3Q5MJ09 141 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 VWA1Q6PCB0 445 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 TIFABQ6ZNK6 161 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 GALNT7Q86SF2 657 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 CCDC25Q86WR0 208 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 WDR75Q8IWA0 830 aaKnown RBP5.96□□□□□ -1.46
SDCBP-210ENST00000522843 C9orf40Q8IXQ3 194 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-210ENST00000522843 MORN4Q8NDC4 146 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 PPHLN1Q8NEY8 458 aaKnown RBP5.96□□□□□ -1.46
SDCBP-210ENST00000522843 ABHD11Q8NFV4 315 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 OR8K3Q8NH51 312 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 SLC2A12Q8TD20 617 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 ZNF721Q8TF20 911 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 STARD4Q96DR4 205 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 SPACA9Q96E40 222 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-210ENST00000522843 ART5Q96L15 291 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 JSRP1Q96MG2 331 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-210ENST00000522843 OR4K3Q96R72 315 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 CSF3RQ99062 836 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 MED18Q9BUE0 208 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 OR8D2Q9GZM6 311 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 OPN3Q9H1Y3 402 aaPredicted RBP5.96□□□□□ -1.46
SDCBP-210ENST00000522843 PIGMQ9H3S5 423 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 CLK4Q9HAZ1 481 aaKnown RBP5.96□□□□□ -1.46
SDCBP-210ENST00000522843 PRTFDC1Q9NRG1 225 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 ZNF226Q9NYT6 803 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 ZIM2Q9NZV7 527 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 SENP1Q9P0U3 644 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 CLCF1Q9UBD9 225 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 IKBKGQ9Y6K9 419 aa5.96□□□□□ -1.46
SDCBP-210ENST00000522843 A0A0G2JK05 382 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 A0A0G2JN53 185 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 ZCWPW2A0A1B0GU75 182 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 TRBC2A0A5B9 178 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 SERINC4A6NH21 518 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 ZAR1LA6NP61 321 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 GOLGA8TH3BQL2 631 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 PSMD12O00232 456 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-210ENST00000522843 NDUFS3O75489 264 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 TRAPPC6AO75865 159 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 TGM6O95932 706 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 SERPIND1P05546 499 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 DANCRP0C864 163 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 CHRM3P20309 590 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 CNTFP26441 200 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 NMBRP28336 390 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 PPARGP37231 505 aaPredicted RBP5.95□□□□□ -1.46
SDCBP-210ENST00000522843 HSD17B7P56937 341 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 RPS4XP62701 263 aaKnown RBP5.95□□□□□ -1.46
SDCBP-210ENST00000522843 PHC1P78364 1004 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 CRADDP78560 199 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 IFFO1Q0D2I5 559 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 ETFDHQ16134 617 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 LGSNQ5TDP6 509 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 HIST2H2BDQ6DRA6 164 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 LCTLQ6UWM7 567 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 DGAT2L6Q6ZPD8 337 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 ESPNLQ6ZVH7 1005 aa5.95□□□□□ -1.46
SDCBP-210ENST00000522843 PIWIL4Q7Z3Z4 852 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms