RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 RRAGDQ9NQL2 400 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 ARL8BQ9NVJ2 186 aa2.58□□□□□ -2
SKP1-204ENST00000517691 THAP1Q9NVV9 213 aa2.58□□□□□ -2
SKP1-204ENST00000517691 QPCTLQ9NXS2 382 aa2.58□□□□□ -2
SKP1-204ENST00000517691 EURLQ9NYK6 297 aa2.58□□□□□ -2
SKP1-204ENST00000517691 PTGFRNQ9P2B2 879 aa2.58□□□□□ -2
SKP1-204ENST00000517691 CDC14AQ9UNH5 594 aa2.58□□□□□ -2
SKP1-204ENST00000517691 PLCL2Q9UPR0 1127 aa2.58□□□□□ -2
SKP1-204ENST00000517691 USP22Q9UPT9 525 aa2.58□□□□□ -2
SKP1-204ENST00000517691 SLC22A14Q9Y267 594 aa2.58□□□□□ -2
SKP1-204ENST00000517691 ASPMQ8IZT6 3477 aa2.58□□□□□ -2
SKP1-204ENST00000517691 IGKV1-8A0A0C4DH67 115 aa2.58□□□□□ -2
SKP1-204ENST00000517691 A0A1W2PPM1 405 aa2.58□□□□□ -2
SKP1-204ENST00000517691 FEZF1A0PJY2 475 aa2.58□□□□□ -2
SKP1-204ENST00000517691 NPIPB13A6NJU9 1138 aa2.58□□□□□ -2
SKP1-204ENST00000517691 NPIPB4C9JG80 1138 aa2.58□□□□□ -2
SKP1-204ENST00000517691 H0YGG7 62 aa2.58□□□□□ -2
SKP1-204ENST00000517691 E2F3O00716 465 aa2.58□□□□□ -2
SKP1-204ENST00000517691 MAP2K7O14733 419 aa2.58□□□□□ -2
SKP1-204ENST00000517691 HAT1O14929 419 aa2.58□□□□□ -2
SKP1-204ENST00000517691 RGS16O15492 202 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 TAPBPO15533 448 aa2.58□□□□□ -2
SKP1-204ENST00000517691 ZNF749O43361 778 aa2.58□□□□□ -2
SKP1-204ENST00000517691 HCRTR1O43613 425 aa2.58□□□□□ -2
SKP1-204ENST00000517691 OR1F1O43749 312 aa2.58□□□□□ -2
SKP1-204ENST00000517691 RAD1O60671 282 aa2.58□□□□□ -2
SKP1-204ENST00000517691 CTSVO60911 334 aa2.58□□□□□ -2
SKP1-204ENST00000517691 CDH16O75309 829 aa2.58□□□□□ -2
SKP1-204ENST00000517691 SLC43A1O75387 559 aa2.58□□□□□ -2
SKP1-204ENST00000517691 SCGB2A1O75556 95 aa2.58□□□□□ -2
SKP1-204ENST00000517691 IGHEP01854 428 aa2.58□□□□□ -2
SKP1-204ENST00000517691 ERGP11308 486 aa2.58□□□□□ -2
SKP1-204ENST00000517691 FGF5P12034 268 aa2.58□□□□□ -2
SKP1-204ENST00000517691 MMP9P14780 707 aa2.58□□□□□ -2
SKP1-204ENST00000517691 EZRP15311 586 aaKnown RBP2.58□□□□□ -2
SKP1-204ENST00000517691 ZNF28P17035 718 aa2.58□□□□□ -2
SKP1-204ENST00000517691 ADRA2CP18825 462 aa2.58□□□□□ -2
SKP1-204ENST00000517691 GNAZP19086 355 aa2.58□□□□□ -2
SKP1-204ENST00000517691 TCN2P20062 427 aa2.58□□□□□ -2
SKP1-204ENST00000517691 TAC1P20366 129 aa2.58□□□□□ -2
SKP1-204ENST00000517691 CD82P27701 267 aa2.58□□□□□ -2
SKP1-204ENST00000517691 AGTR2P50052 363 aa2.58□□□□□ -2
SKP1-204ENST00000517691 F2RL1P55085 397 aa2.58□□□□□ -2
SKP1-204ENST00000517691 ADAM8P78325 824 aa2.58□□□□□ -2
SKP1-204ENST00000517691 MXRA7P84157 204 aa2.58□□□□□ -2
SKP1-204ENST00000517691 CDKL1Q00532 357 aa2.58□□□□□ -2
SKP1-204ENST00000517691 DUSP8Q13202 625 aa2.58□□□□□ -2
SKP1-204ENST00000517691 SNTB2Q13425 540 aaKnown RBP2.58□□□□□ -2
SKP1-204ENST00000517691 HIST2H2ACQ16777 129 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 NADK2Q4G0N4 442 aa2.58□□□□□ -2
SKP1-204ENST00000517691 XKR6Q5GH73 641 aa2.58□□□□□ -2
SKP1-204ENST00000517691 MANEAQ5SRI9 462 aa2.58□□□□□ -2
SKP1-204ENST00000517691 ATAD3BQ5T9A4 648 aa2.58□□□□□ -2
SKP1-204ENST00000517691 PRAMEF8Q5VWM4 474 aa2.58□□□□□ -2
SKP1-204ENST00000517691 MLIPQ5VWP3 458 aa2.58□□□□□ -2
SKP1-204ENST00000517691 HIST2H2AA3Q6FI13 130 aa2.58□□□□□ -2
SKP1-204ENST00000517691 FRMPD2BQ6IN97 320 aa2.58□□□□□ -2
SKP1-204ENST00000517691 FBXO42Q6P3S6 717 aa2.58□□□□□ -2
SKP1-204ENST00000517691 FAM199XQ6PEV8 388 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 C19orf48Q6RUI8 117 aa2.58□□□□□ -2
SKP1-204ENST00000517691 LCTLQ6UWM7 567 aa2.58□□□□□ -2
SKP1-204ENST00000517691 TIFABQ6ZNK6 161 aa2.58□□□□□ -2
SKP1-204ENST00000517691 CFAP77Q6ZQR2 320 aa2.58□□□□□ -2
SKP1-204ENST00000517691 CCDC80Q76M96 950 aa2.58□□□□□ -2
SKP1-204ENST00000517691 SYVN1Q86TM6 617 aa2.58□□□□□ -2
SKP1-204ENST00000517691 PAQR7Q86WK9 346 aa2.58□□□□□ -2
SKP1-204ENST00000517691 ZNF573Q86YE8 665 aa2.58□□□□□ -2
SKP1-204ENST00000517691 SLC15A3Q8IY34 581 aa2.58□□□□□ -2
SKP1-204ENST00000517691 CENPLQ8N0S6 344 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 TCAIMQ8N3R3 496 aa2.58□□□□□ -2
SKP1-204ENST00000517691 CSNK1A1LQ8N752 337 aa2.58□□□□□ -2
SKP1-204ENST00000517691 TRIML2Q8N7C3 387 aa2.58□□□□□ -2
SKP1-204ENST00000517691 ENDOVQ8N8Q3 282 aaKnown RBP2.58□□□□□ -2
SKP1-204ENST00000517691 CCDC63Q8NA47 563 aa2.58□□□□□ -2
SKP1-204ENST00000517691 TTC29Q8NA56 475 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 NLGN4YQ8NFZ3 816 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 HUS1BQ8NHY5 278 aa2.58□□□□□ -2
SKP1-204ENST00000517691 PSMA8Q8TAA3 256 aa2.58□□□□□ -2
SKP1-204ENST00000517691 RHEBL1Q8TAI7 183 aa2.58□□□□□ -2
SKP1-204ENST00000517691 DNAJB14Q8TBM8 379 aa2.58□□□□□ -2
SKP1-204ENST00000517691 PPP4R1Q8TF05 950 aa2.58□□□□□ -2
SKP1-204ENST00000517691 ABHD5Q8WTS1 349 aa2.58□□□□□ -2
SKP1-204ENST00000517691 PTPMT1Q8WUK0 201 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 SELENOMQ8WWX9 145 aa2.58□□□□□ -2
SKP1-204ENST00000517691 NEIL2Q969S2 332 aa2.58□□□□□ -2
SKP1-204ENST00000517691 ST6GALNAC6Q969X2 333 aa2.58□□□□□ -2
SKP1-204ENST00000517691 KIAA1143Q96AT1 154 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 RHBDF1Q96CC6 855 aa2.58□□□□□ -2
SKP1-204ENST00000517691 OR4K3Q96R72 315 aa2.58□□□□□ -2
SKP1-204ENST00000517691 MACROD1Q9BQ69 325 aa2.58□□□□□ -2
SKP1-204ENST00000517691 MRPL57Q9BQC6 102 aaKnown RBP2.58□□□□□ -2
SKP1-204ENST00000517691 MRPL1Q9BYD6 325 aaKnown RBP2.58□□□□□ -2
SKP1-204ENST00000517691 NLNQ9BYT8 704 aa2.58□□□□□ -2
SKP1-204ENST00000517691 RTN4RQ9BZR6 473 aa2.58□□□□□ -2
SKP1-204ENST00000517691 IQCGQ9H095 443 aaKnown RBP2.58□□□□□ -2
SKP1-204ENST00000517691 ACTR5Q9H9F9 607 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 GPN2Q9H9Y4 310 aaPredicted RBP2.58□□□□□ -2
SKP1-204ENST00000517691 GPR35Q9HC97 309 aa2.58□□□□□ -2
SKP1-204ENST00000517691 TXLNGQ9NUQ3 528 aa2.58□□□□□ -2
SKP1-204ENST00000517691 TMEM184CQ9NVA4 438 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms