RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 OR6Y1Q8NGX8 325 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 WNT2BQ93097 391 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 MS4A4EQ96PG1 132 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 TM9SF2Q99805 663 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 TMEM109Q9BVC6 243 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 RTN4RQ9BZR6 473 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 DSN1Q9H410 356 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 C3orf14Q9HBI5 128 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 EML4Q9HC35 981 aaKnown RBP9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 EQTNQ9NQ60 294 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 BAIAP2L1Q9UHR4 511 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 ITGB1BP2Q9UKP3 347 aa9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 RPH3AQ9Y2J0 694 aaPredicted RBP9.47□□□□□ -0.89
HMGXB3-205ENST00000514469 IGLV3-32A0A0A0MS00 114 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 TMEM114B3SHH9 223 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 EEF1E1-BLOC1S5C9J1V9 151 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 SCAMP2O15127 329 aaKnown RBP9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 EEF1E1O43324 174 aaKnown RBP9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 CTAG2O75638 210 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 KCNH1O95259 989 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 UTS2O95399 124 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 BPGMP07738 259 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 NGFRP08138 427 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 ACP2P11117 423 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 CREB1P16220 341 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 TCEA1P23193 301 aaKnown RBP9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 MAPK1P28482 360 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 HPCAL1P37235 193 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 ETV4P43268 484 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 RFX3P48380 749 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 CLK3P49761 638 aaKnown RBP9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 AGFG1P52594 562 aaKnown RBP9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 DGKQP52824 942 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 MANFP55145 182 aaKnown RBP9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 PRR5P85299 388 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 FOXF2Q12947 444 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 STX5Q13190 355 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 MLC1Q15049 377 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 GRAMD1BQ3KR37 738 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 VPS26BQ4G0F5 336 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 EXOSC6Q5RKV6 272 aaKnown RBP9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 MFSD12Q6NUT3 480 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 PLXDC2Q6UX71 529 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 LRIG3Q6UXM1 1119 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 SPNS3Q6ZMD2 512 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 R3HCC1LQ7Z5L2 792 aaKnown RBP9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 MARCH3Q86UD3 253 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 NUP43Q8NFH3 380 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 CEP70Q8NHQ1 597 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 AGR3Q8TD06 166 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 FAM222BQ8WU58 562 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 PIK3R3Q92569 461 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 RMND5BQ96G75 393 aaPredicted RBP9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 PPP3R2Q96LZ3 170 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 ACBD3Q9H3P7 528 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 SDHAF3Q9NRP4 125 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 SIRT3Q9NTG7 399 aaPredicted RBP9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 MED11Q9P086 117 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 SH3BP4Q9P0V3 963 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 GIMAP2Q9UG22 337 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 ATP6V1HQ9UI12 483 aa9.46□□□□□ -0.9
HMGXB3-205ENST00000514469 A6NNC1 897 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 LINC01387J3KSC0 135 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 EMC8O43402 210 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 SLU7O95391 586 aaKnown RBP9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 ANGPTL1O95841 491 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 PEPDP12955 493 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 DDX5P17844 614 aaKnown RBP9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 HK1P19367 917 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 GABRA3P34903 492 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 RPL3P39023 403 aaKnown RBP9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 PTGR1Q14914 329 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 GLYR1Q49A26 553 aaPredicted RBP9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 ATP6AP1LQ52LC2 224 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 RAET1LQ5VY80 246 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 ZCCHC12Q6PEW1 402 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 APOOLQ6UXV4 268 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 SZRD1Q7Z422 152 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 GRAMD2AQ8IUY3 354 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 GCNT2Q8N0V5 402 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 SLC16A11Q8NCK7 471 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 FBXO30Q8TB52 745 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 FAM110BQ8TC76 370 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 GPR151Q8TDV0 419 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 INTS12Q96CB8 462 aaKnown RBP9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 FAM120BQ96EK7 910 aaKnown RBP9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 C1GALT1C1Q96EU7 318 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 C3orf30Q96M34 536 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 GPATCH1Q9BRR8 931 aaKnown RBP9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 TBL1XR1Q9BZK7 514 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 PTGES2Q9H7Z7 377 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 RASSF1Q9NS23 344 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 DNAJB12Q9NXW2 375 aaKnown RBP9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 ZDHHC2Q9UIJ5 367 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 V9GYY5 206 aaPredicted RBP9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 HIVEP1P15822 2718 aa9.45□□□□□ -0.9
HMGXB3-205ENST00000514469 NINQ8N4C6 2090 aa9.44□□□□□ -0.9
HMGXB3-205ENST00000514469 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms