RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 DGKQP52824 942 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 MVDP53602 400 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 ADORA2A-AS1P86434 159 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 BIKQ13323 160 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 MLC1Q15049 377 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 HYAL4Q2M3T9 481 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 SMU1Q2TAY7 513 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 LSM12Q3MHD2 195 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 CCNJQ5T5M9 372 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 OPN5Q6U736 354 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 EPGNQ6UW88 154 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 Q6ZPB1 254 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 RGS9BPQ6ZS82 235 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 MSRB3Q8IXL7 192 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC34A3Q8N130 599 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 TMEM178AQ8NBL3 297 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC16A11Q8NCK7 471 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 FAM13CQ8NE31 585 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 OR5D16Q8NGK9 328 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 OR5L2Q8NGL0 311 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 DNAJB8Q8NHS0 232 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 ERP27Q96DN0 273 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 ARSGQ96EG1 525 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 THOC1Q96FV9 657 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 RILPQ96NA2 401 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 YIPF4Q9BSR8 244 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 INPP5KQ9BT40 448 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 RSPO3Q9BXY4 272 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 ACSS1Q9NUB1 689 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 DDX18Q9NVP1 670 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 NKIRAS1Q9NYS0 192 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 FBXL2Q9UKC9 423 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 WBP11Q9Y2W2 641 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 KLF13Q9Y2Y9 288 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 ICE1Q9Y2F5 2266 aa6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 SPTBN1Q01082 2364 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-207ENST00000509162 WIPF3A6NGB9 483 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 PRAMEF25A6NGN4 478 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 NPIPB9F8W1W9 429 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 ACOX3O15254 700 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 FADS1O60427 444 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 EDF1O60869 148 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 IGHG3P01860 377 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 CAPN3P20807 821 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 ASMTP46597 345 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 GYS2P54840 703 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 CASP9P55211 416 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 ALDH6A1Q02252 535 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 LASP1Q14847 261 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 CD226Q15762 336 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 GRAMD1BQ3KR37 738 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 PDCD4Q53EL6 469 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 FBXW10Q5XX13 1052 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 RTL6Q6ICC9 239 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 TMEM81Q6P7N7 255 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 PAOXQ6QHF9 649 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 C3P1Q6ZMU1 363 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 FUNDC1Q8IVP5 155 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC44A2Q8IWA5 706 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 LRRC34Q8IZ02 419 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 SLC15A4Q8N697 577 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 WDSUB1Q8N9V3 476 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 POGLUT1Q8NBL1 392 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 NUP43Q8NFH3 380 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 PIWIL2Q8TC59 973 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 FAM110BQ8TC76 370 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 ACTRT2Q8TDY3 377 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 OR5P2Q8WZ92 322 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 CDS1Q92903 461 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 VPS33AQ96AX1 596 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 TESCQ96BS2 214 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 MTERF3Q96E29 417 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 MS4A4EQ96PG1 132 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 DMRTA2Q96SC8 542 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 ADOQ96SZ5 270 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 FAM173AQ9BQD7 235 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 DUSP26Q9BV47 211 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 OSBPL11Q9BXB4 747 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 ANGPTL4Q9BY76 406 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 SDR39U1Q9NRG7 319 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 SACM1LQ9NTJ5 587 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 GIMAP4Q9NUV9 329 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 ARGLU1Q9NWB6 273 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 SH3BP4Q9P0V3 963 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 SEC14L3Q9UDX4 400 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 KCNE5Q9UJ90 142 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 SH3BGRL2Q9UJC5 107 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 OSGIN2Q9Y236 505 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 C15orf41Q9Y2V0 281 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 FAM215AQ9Y5M1 114 aa6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-207ENST00000509162 CELSR2Q9HCU4 2923 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 NUP214P35658 2090 aaPredicted RBP6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 DNAJC13O75165 2243 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 PCNX3Q9H6A9 2034 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 TRBV5-3A0A0A0MS03 114 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 RNF103-CHMP3A0A140T963 221 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 A0A1B0GTH9 108 aa6.56□□□□□ -1.36
TOPBP1-207ENST00000509162 A0A1B0GVC2 190 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms