RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ARHGAP11BQ3KRB8 267 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 FLYWCH1Q4VC44 716 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 COQ5Q5HYK3 327 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 TIGD3Q6B0B8 471 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 ARHGAP11AQ6P4F7 1023 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 DNAJC14Q6Y2X3 702 aaPredicted RBP8.37□□□□□ -1.07
NUP54-207ENST00000508583 WDR53Q7Z5U6 358 aaPredicted RBP8.37□□□□□ -1.07
NUP54-207ENST00000508583 PCYOX1LQ8NBM8 494 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 CHDHQ8NE62 594 aaPredicted RBP8.37□□□□□ -1.07
NUP54-207ENST00000508583 OR4N2Q8NGD1 307 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 FAM110BQ8TC76 370 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 NUDT8Q8WV74 236 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 C10orf82Q8WW14 230 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 GTF2H4Q92759 462 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 PMM1Q92871 262 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 CDS1Q92903 461 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 C16orf58Q96GQ5 468 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 SH3GL1Q99961 368 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 NMUR2Q9GZQ4 415 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 FAM107BQ9H098 131 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 OR51I1Q9H343 314 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 ZNF385DQ9H6B1 395 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 LDAHQ9H6V9 325 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 ZNF703Q9H7S9 590 aaPredicted RBP8.37□□□□□ -1.07
NUP54-207ENST00000508583 PTGES2Q9H7Z7 377 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 ZDHHC11Q9H8X9 412 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 TPT1P8Q9HAU6 139 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 SERHLQ9NQF3 203 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 DEPPQ9NTK1 212 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 TUBA8Q9NY65 449 aaPredicted RBP8.37□□□□□ -1.07
NUP54-207ENST00000508583 PPP4R1LQ9P1A2 415 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 P2RX2Q9UBL9 471 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 NPIPA1Q9UND3 350 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 CAPN7Q9Y6W3 813 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 NBASA2RRP1 2371 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 NINQ8N4C6 2090 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 SHANK1Q9Y566 2161 aa8.37□□□□□ -1.07
NUP54-207ENST00000508583 ESPL1Q14674 2120 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 A0A0G2JMM0 328 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 A0A1W2PPB8 328 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 A0A1W2PQD3 144 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 A0A1W2PRS3 328 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 GXYLT2A0PJZ3 443 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 OR14I1A6ND48 311 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 KIR3DP1A8MWS1 328 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 ALG1L2C9J202 215 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 FAM47E-STBD1D6RA91 191 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 G3V3Y1 287 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 NDUFB5O43674 189 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 SUSD5O60279 629 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 CDC40O60508 579 aaKnown RBP eCLIP8.36□□□□□ -1.07
NUP54-207ENST00000508583 NME6O75414 186 aaPredicted RBP8.36□□□□□ -1.07
NUP54-207ENST00000508583 CBR3O75828 277 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 WISP1O95388 367 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 ABOP16442 354 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 MSX1P28360 303 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 CRATP43155 626 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 ZFP36L2P47974 494 aaKnown RBP8.36□□□□□ -1.07
NUP54-207ENST00000508583 MAN2A2P49641 1150 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 TDGF1P3P51864 188 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 RPS26P62854 115 aaKnown RBP8.36□□□□□ -1.07
NUP54-207ENST00000508583 FOXO1Q12778 655 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 STX5Q13190 355 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 TOMM20Q15388 145 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 MMEL1Q495T6 779 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 LRIF1Q5T3J3 769 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 CGB2Q6NT52 195 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 TNFAIP8L2Q6P589 184 aaPredicted RBP8.36□□□□□ -1.07
NUP54-207ENST00000508583 FIGNL1Q6PIW4 674 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 MTERF4Q7Z6M4 381 aaKnown RBP8.36□□□□□ -1.07
NUP54-207ENST00000508583 RNF130Q86XS8 419 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 PLCZ1Q86YW0 608 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 FUNDC1Q8IVP5 155 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 SIAH3Q8IW03 269 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 TMEM251Q8N6I4 163 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 OR4K17Q8NGC6 315 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 OR52N2Q8NGI0 321 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 OR5D16Q8NGK9 328 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 RNF138Q8WVD3 245 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 XAGE5Q8WWM1 108 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 TRNT1Q96Q11 434 aaKnown RBP8.36□□□□□ -1.07
NUP54-207ENST00000508583 NODALQ96S42 347 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 ELAC2Q9BQ52 826 aaKnown RBP8.36□□□□□ -1.07
NUP54-207ENST00000508583 INPP5KQ9BT40 448 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 EXO5Q9H790 373 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 ACKR4Q9NPB9 350 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 SAR1AQ9NR31 198 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.36□□□□□ -1.07
NUP54-207ENST00000508583 NTNG1Q9Y2I2 539 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 C15orf41Q9Y2V0 281 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 PCDHB14Q9Y5E9 798 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 GMEB1Q9Y692 573 aa8.36□□□□□ -1.07
NUP54-207ENST00000508583 EML6Q6ZMW3 1958 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 ZGRF1Q86YA3 2104 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 A0A1B0GUH1 482 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 LRRC3CA6NJW4 275 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 FAM166BA8MTA8 275 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 LINC01387J3KSC0 135 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 CLIC1O00299 241 aa8.35□□□□□ -1.07
NUP54-207ENST00000508583 PRRG2O14669 202 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms