RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 GGNQ86UU5 652 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 STK32CQ86UX6 486 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 EXOC3L1Q86VI1 746 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 NOA1Q8NC60 698 aaKnown RBP8.39□□□□□ -1.07
NEDD9-211ENST00000508546 SPATA4Q8NEY3 305 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 STEAP2Q8NFT2 490 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 TM4SF18Q96CE8 201 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 NXNL1Q96CM4 212 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 C1GALT1C1Q96EU7 318 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 HS6ST2Q96MM7 605 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 FRG2BQ96QU4 278 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 RHNO1Q9BSD3 238 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 HDHD5Q9BXW7 423 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 BEX2Q9BXY8 128 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 ESRP2Q9H6T0 727 aaKnown RBP8.39□□□□□ -1.07
NEDD9-211ENST00000508546 PTGES2Q9H7Z7 377 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 NGBQ9NPG2 151 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 PAQR5Q9NXK6 330 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-211ENST00000508546 MED11Q9P086 117 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 STOML1Q9UBI4 398 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 ABCG2Q9UNQ0 655 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 TNPO3Q9Y5L0 923 aaKnown RBP8.39□□□□□ -1.07
NEDD9-211ENST00000508546 SNX8Q9Y5X2 465 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 ZNF780BQ9Y6R6 833 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 TCRBV9S1A1TA0A576 114 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 SCO2O43819 266 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 GPRIN2O60269 458 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 NDUFS7O75251 213 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 PLGP00747 810 aaPredicted RBP8.38□□□□□ -1.07
NEDD9-211ENST00000508546 FESP07332 822 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 GFAPP14136 432 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 SLC6A8P48029 635 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 TRA2BP62995 288 aaKnown RBP8.38□□□□□ -1.07
NEDD9-211ENST00000508546 VLDLRP98155 873 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 DR1Q01658 176 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 NRF1Q16656 503 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 CTU2Q2VPK5 515 aaKnown RBP8.38□□□□□ -1.07
NEDD9-211ENST00000508546 COMMD6Q7Z4G1 85 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 CCDC91Q7Z6B0 441 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 DTX2Q86UW9 622 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 CENPLQ8N0S6 344 aaPredicted RBP8.38□□□□□ -1.07
NEDD9-211ENST00000508546 MMGT1Q8N4V1 131 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 OR10H5Q8NGA6 315 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 OR52B6Q8NGF0 335 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 OR5M1Q8NGP8 315 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 UHMK1Q8TAS1 419 aaKnown RBP8.38□□□□□ -1.07
NEDD9-211ENST00000508546 PYROXD1Q8WU10 500 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 NEUROG1Q92886 237 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 S100PBPQ96BU1 408 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 EFHD2Q96C19 240 aaPredicted RBP8.38□□□□□ -1.07
NEDD9-211ENST00000508546 TNFRSF13CQ96RJ3 184 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 KCNK17Q96T54 332 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 TRAF4Q9BUZ4 470 aaPredicted RBP8.38□□□□□ -1.07
NEDD9-211ENST00000508546 NTMT1Q9BV86 223 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 FAIM2Q9BWQ8 316 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 PRRG4Q9BZD6 226 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 ALG2Q9H553 416 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 ANKRA2Q9H9E1 313 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 FOLH1BQ9HBA9 442 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 GDF2Q9UK05 429 aaPredicted RBP8.38□□□□□ -1.07
NEDD9-211ENST00000508546 CLEC4AQ9UMR7 237 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 ARFGEF3Q5TH69 2177 aa8.38□□□□□ -1.07
NEDD9-211ENST00000508546 IGHV4-30-2A0A087WSY4 118 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 IGLV3-32A0A0A0MS00 114 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 ELOA3DA6NLF2 546 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-211ENST00000508546 CCDC188H7C350 402 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 OR7A17O14581 309 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 CLOCKO15516 846 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 PLOD3O60568 738 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 GCM2O75603 506 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-211ENST00000508546 CD8AP01732 235 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 CFPP27918 469 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 ADH6P28332 368 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 EIF1AXP47813 144 aaKnown RBP8.37□□□□□ -1.07
NEDD9-211ENST00000508546 CCNG1P51959 295 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 CASP9P55211 416 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 DSCR9P59020 149 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 PSG6Q00889 435 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 LOXL1Q08397 574 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-211ENST00000508546 GALNT1Q10472 559 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-211ENST00000508546 FAPQ12884 760 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 IFT88Q13099 833 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 ACAP2Q15057 778 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 FAM83EQ2M2I3 478 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 ELOA3BQ3SY89 546 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 GGTA1PQ4G0N0 100 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 TTC19Q6DKK2 380 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-211ENST00000508546 C8orf74Q6P047 294 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 FAM180BQ6P0A1 224 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 SLC44A2Q8IWA5 706 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-211ENST00000508546 SAMD14Q8IZD0 417 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-211ENST00000508546 GABRG1Q8N1C3 465 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 ELOA3Q8NG57 546 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 OR4N2Q8NGD1 307 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 HSD17B8Q92506 261 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 ADGRG7Q96K78 797 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 CDK15Q96Q40 435 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 USB1Q9BQ65 265 aaKnown RBP8.37□□□□□ -1.07
NEDD9-211ENST00000508546 RHOXF2Q9BQY4 288 aa8.37□□□□□ -1.07
NEDD9-211ENST00000508546 RTN4RQ9BZR6 473 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms