RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 CT45A10P0DMU9 189 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 PGAM2P15259 253 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 PTMSP20962 102 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 CDH5P33151 784 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 ACVR1BP36896 505 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 ACAA2P42765 397 aaKnown RBP3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 MAGEA9P43362 315 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 ALDH3B2P48448 385 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 PLOD1Q02809 727 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 PUDPQ08623 228 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 CYP51A1Q16850 503 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 SLC25A30Q5SVS4 291 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 DCST2Q5T1A1 773 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 ATAD3CQ5T2N8 411 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 RIPPLY2Q5TAB7 128 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 ZNF774Q6NX45 483 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 SCYL2Q6P3W7 929 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 CBLN3Q6UW01 205 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 Q8N9G6 341 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 OR5AU1Q8NGC0 362 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 TYMSOSQ8TAI1 123 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 PPP1R16AQ96I34 528 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 RANBP9Q96S59 729 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 FEM1AQ9BSK4 669 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 GSDMCQ9BYG8 508 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 SLC25A51Q9H1U9 297 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 OPN3Q9H1Y3 402 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 RBM28Q9NW13 759 aaKnown RBP3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 RSPH14Q9UHP6 348 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 DUSP12Q9UNI6 340 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 B9D1Q9UPM9 204 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 GMPPBQ9Y5P6 360 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 METP08581 1390 aa3.11□□□□□ -1.91
HMGB1P28-201ENST00000507778 A0A1B0GWJ7 208 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 SLC17A2O00624 439 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 NDC80O14777 642 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 DUX1O43812 170 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 PEX11AO75192 247 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 STX11O75558 287 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 IDH1O75874 414 aaKnown RBP3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 MFN2O95140 757 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 SLC2A10O95528 541 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 MBD3O95983 291 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 CSF2P04141 144 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 UMPSP11172 480 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 ANXA3P12429 323 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 HTR2AP28223 471 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 DLSTP36957 453 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 RGS19P49795 217 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 NUCB2P80303 420 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 KLHL30Q0D2K2 578 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 OVGP1Q12889 678 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 ZNF57Q68EA5 555 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 ASPHD2Q6ICH7 369 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 SULT1C3Q6IMI6 304 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 STAC2Q6ZMT1 411 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 LANCL3Q6ZV70 420 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 CYS1Q717R9 158 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 HSD11B1LQ7Z5J1 315 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 HPS6Q86YV9 775 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 BPIFB2Q8N4F0 458 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 FADS6Q8N9I5 356 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 OR10T2Q8NGX3 314 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 SYAP1Q96A49 352 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 DHTKD1Q96HY7 919 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 ELOVL4Q9GZR5 314 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 DHX33Q9H6R0 707 aaKnown RBP3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 UTP6Q9NYH9 597 aaKnown RBP3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 LAMP5Q9UJQ1 280 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 NAALAD2Q9Y3Q0 740 aa3.1□□□□□ -1.91
HMGB1P28-201ENST00000507778 FAM74A7A6NL05 159 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 GPAA1O43292 621 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 TRIM3O75382 744 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 CHRNA1P02708 482 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 THY1P04216 161 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 SLC35E2P0CK97 266 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 TSPY4P0CV99 314 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 TSPY10P0CW01 314 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 BCKDHAP12694 445 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 KRT13P13646 458 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 XRCC1P18887 633 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 PSMA2P25787 234 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 RPL4P36578 427 aaKnown RBP3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 XCR1P46094 333 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 NOVA1P51513 510 aaKnown RBP3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 SLC25A1P53007 311 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 NTHL1P78549 312 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 LINC01620Q4KN68 170 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 FAM74A3Q4VXF1 159 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 MARC1Q5VT66 337 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 OLFML2AQ68BL7 652 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 C2orf66Q6UXQ4 117 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 BAIAP2L2Q6UXY1 529 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 IFNEQ86WN2 208 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 HSCBQ8IWL3 235 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 MCOLN2Q8IZK6 566 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 ZSCAN4Q8NAM6 433 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 C18orf25Q96B23 403 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 AKR1E2Q96JD6 320 aa3.09□□□□□ -1.91
HMGB1P28-201ENST00000507778 TSGA13Q96PP4 275 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms