RNA–Protein interactions for RNA: ENST00000506556.1

THUMPD3P1-201, Transcript of THUMP domain containing 3 pseudogene 1, humanhuman

BASIC

Gene THUMPD3P1, Length 1,480 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3P1-201ENST00000506556 GMPPAQ96IJ6 420 aaPredicted RBP3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 PRRC1Q96M27 445 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 KCNS3Q9BQ31 491 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 UPF3BQ9BZI7 483 aaKnown RBP3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 ATP13A3Q9H7F0 1226 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 ZNF696Q9H7X3 374 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 DCLRE1BQ9H816 532 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 GEMIN7Q9H840 131 aaKnown RBP3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 MAN2C1Q9NTJ4 1040 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 MRPL22Q9NWU5 206 aaKnown RBP3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 MTCH1Q9NZJ7 389 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 VPS54Q9P1Q0 977 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 RNF14Q9UBS8 474 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 PEF1Q9UBV8 284 aaKnown RBP3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 CTSFQ9UBX1 484 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 CYTH4Q9UIA0 394 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 ERRFI1Q9UJM3 462 aaPredicted RBP3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 PPP2R2CQ9Y2T4 447 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 RHBDD3Q9Y3P4 386 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 C9orf84Q5VXU9 1444 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 ARID2Q68CP9 1835 aa3.26□□□□□ -1.89
THUMPD3P1-201ENST00000506556 SBNO1A3KN83 1393 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 NINLQ9Y2I6 1382 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 TCF20Q9UGU0 1960 aaKnown RBP3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 ZNF518AQ6AHZ1 1483 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 A0A087WYN8 130 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 A0A087X0K7 114 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 TRAV25A0A0B4J276 109 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 FAM240BA0A1B0GVZ2 78 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 TMEM129A0AVI4 362 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 FAM149AA5PLN7 773 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 METTL21EPA6NDL7 271 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 SNURFLB1AK76 121 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 WASH3PC4AMC7 463 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 PRSS46E5RG02 174 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 SULT1B1O43704 296 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 SCO2O43819 266 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 FCMRO60667 390 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 NDUFS6O75380 124 aaKnown RBP3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 STBD1O95210 358 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 OR5F1O95221 314 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 LCA5LO95447 670 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 GAS8O95995 478 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 SP9P0CG40 484 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 PPP1R2P41236 205 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 PTGFRP43088 359 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 NSFP46459 744 aaKnown RBP3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 CEBPDP49716 269 aaPredicted RBP3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 NR0B1P51843 470 aaKnown RBP3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 YWHAEP62258 255 aaKnown RBP3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 BDH1Q02338 343 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 GUCY2DQ02846 1103 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 KDSRQ06136 332 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 MERTKQ12866 999 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 SRSF9Q13242 221 aaKnown RBP eCLIP3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 MAB21L1Q13394 359 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 SELPLGQ14242 412 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 PON2Q15165 354 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 P2RY14Q15391 338 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 TGFBIQ15582 683 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 TRIP10Q15642 601 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 EXT1Q16394 746 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 CAMK4Q16566 473 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 ACKR1Q16570 336 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 MAPK6Q16659 721 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 PARP6Q2NL67 630 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 HKDC1Q2TB90 917 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 TEX44Q53QW1 395 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 MLIPQ5VWP3 458 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 PTRHD1Q6GMV3 140 aaKnown RBP3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 PPP1R2P3Q6NXS1 205 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 PAQR9Q6ZVX9 377 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 CYP4V2Q6ZWL3 525 aaPredicted RBP3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 NDUFAF7Q7L592 441 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 C16orf62Q7Z3J2 963 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 CPEB2Q7Z5Q1 589 aaKnown RBP3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 LUZP2Q86TE4 346 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 LINC00523Q86TU6 105 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 ZNF329Q86UD4 541 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 VPS36Q86VN1 386 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 FAM131BQ86XD5 332 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 C12orf56Q8IXR9 622 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 GPR65Q8IYL9 337 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 LRRC75A-AS1Q8N1F1 130 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 ZNF248Q8NDW4 579 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 TRPV3Q8NET8 790 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 OR4K14Q8NGD5 310 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 OR5T2Q8NGG2 359 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 OR4A15Q8NGL6 344 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 OR6S1Q8NH40 331 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 ANGPTL6Q8NI99 470 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 KCNG3Q8TAE7 436 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 NDNFQ8TB73 568 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 MAPK15Q8TD08 544 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 ADIPOR1Q96A54 375 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 LITAFQ99732 161 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 TSG101Q99816 390 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 ACBD6Q9BR61 282 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 CHRDL1Q9BU40 450 aa3.25□□□□□ -1.89
THUMPD3P1-201ENST00000506556 SPZ1Q9BXG8 430 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms