RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 LDAHQ9H6V9 325 aa16.26■□□□□ 0.19
SMN1-204ENST00000506163 NEUROD4Q9HD90 331 aa16.26■□□□□ 0.19
SMN1-204ENST00000506163 SDR39U1Q9NRG7 319 aaPredicted RBP16.26■□□□□ 0.19
SMN1-204ENST00000506163 PNPLA3Q9NST1 481 aa16.26■□□□□ 0.19
SMN1-204ENST00000506163 WIF1Q9Y5W5 379 aa16.26■□□□□ 0.19
SMN1-204ENST00000506163 NCOA6Q14686 2063 aaPredicted RBP16.26■□□□□ 0.19
SMN1-204ENST00000506163 A1L4Q6 167 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 PRRG2O14669 202 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 SCO2O43819 266 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 CPSF4O95639 269 aaKnown RBP16.25■□□□□ 0.19
SMN1-204ENST00000506163 ALOX5P09917 674 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 ELAVL4P26378 380 aaKnown RBP16.25■□□□□ 0.19
SMN1-204ENST00000506163 S100A3P33764 101 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 PRIM2P49643 509 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 CASP9P55211 416 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 CDSNQ15517 529 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 SPDYE7PQ495Y7 208 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 VPS26BQ4G0F5 336 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 PDCD4Q53EL6 469 aaKnown RBP16.25■□□□□ 0.19
SMN1-204ENST00000506163 C6orf120Q7Z4R8 191 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 MARCH3Q86UD3 253 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 PLCZ1Q86YW0 608 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 OR4A15Q8NGL6 344 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 OR9I1Q8NGQ6 314 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 ITLN2Q8WWU7 325 aaPredicted RBP16.25■□□□□ 0.19
SMN1-204ENST00000506163 JADE3Q92613 823 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 INPP5KQ9BT40 448 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 ACTRT3Q9BYD9 372 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 PIGUQ9H490 435 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 DUSP22Q9NRW4 184 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 B4GALT7Q9UBV7 327 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 SLC6A5Q9Y345 797 aa16.25■□□□□ 0.19
SMN1-204ENST00000506163 OR14I1A6ND48 311 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 UBDO15205 165 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 KCNH1O95259 989 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 TGDSO95455 350 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 PGRP06401 933 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 IDO1P14902 403 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 CD1EP15812 388 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 CASP6P55212 293 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMN1-204ENST00000506163 WIPI1Q5MNZ9 446 aaPredicted RBP16.24■□□□□ 0.19
SMN1-204ENST00000506163 ANXA8L1Q5VT79 327 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 HIST2H2BCQ6DN03 193 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 YRDCQ86U90 279 aaKnown RBP16.24■□□□□ 0.19
SMN1-204ENST00000506163 FAM83FQ8NEG4 500 aaPredicted RBP16.24■□□□□ 0.19
SMN1-204ENST00000506163 OR5D16Q8NGK9 328 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 THOC1Q96FV9 657 aaKnown RBP16.24■□□□□ 0.19
SMN1-204ENST00000506163 CCDC115Q96NT0 180 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 STACQ99469 402 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 BTBD2Q9BX70 525 aa16.24■□□□□ 0.19
SMN1-204ENST00000506163 FAM120CQ9NX05 1096 aaKnown RBP16.24■□□□□ 0.19
SMN1-204ENST00000506163 RNF103-CHMP3A0A140T963 221 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 ZIC3O60481 467 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 SLC22A3O75751 556 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 CBR3O75828 277 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 SOAT1P35610 550 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 CDKN2CP42773 168 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 AQP5P55064 265 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 GSTA3Q16772 222 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 DPY19L1Q2PZI1 675 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 DCST1Q5T197 706 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 RTL6Q6ICC9 239 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 COX18Q8N8Q8 333 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 FADS6Q8N9I5 356 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 GOT1L1Q8NHS2 421 aaPredicted RBP16.23■□□□□ 0.19
SMN1-204ENST00000506163 OR7D2Q96RA2 312 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 EXO5Q9H790 373 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 TCF7L2Q9NQB0 619 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 SLC6A13Q9NSD5 602 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 GIN1Q9NXP7 522 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 BTNL2Q9UIR0 455 aa16.23■□□□□ 0.19
SMN1-204ENST00000506163 MRTO4Q9UKD2 239 aaKnown RBP16.23■□□□□ 0.19
SMN1-204ENST00000506163 FAF1Q9UNN5 650 aaPredicted RBP16.23■□□□□ 0.19
SMN1-204ENST00000506163 E9PLN8 166 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 UQCRC2P22695 453 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 PSMD4P55036 377 aaKnown RBP16.22■□□□□ 0.19
SMN1-204ENST00000506163 PER3P56645 1201 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 POU6F2P78424 691 aaPredicted RBP16.22■□□□□ 0.19
SMN1-204ENST00000506163 CRYZQ08257 329 aaKnown RBP16.22■□□□□ 0.19
SMN1-204ENST00000506163 TOMM20Q15388 145 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 OLIG3Q7RTU3 272 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 ADAMTS15Q8TE58 950 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 DUSP19Q8WTR2 217 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 MOAP1Q96BY2 351 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 OR52E6Q96RD3 313 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 TIMP4Q99727 224 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 KLHDC3Q9BQ90 382 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 VKORC1Q9BQB6 163 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 OR2B2Q9GZK3 357 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 DSN1Q9H410 356 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 ZIM2Q9NZV7 527 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 MED11Q9P086 117 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 ACAD8Q9UKU7 415 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 ABCG2Q9UNQ0 655 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 FAM215AQ9Y5M1 114 aa16.22■□□□□ 0.19
SMN1-204ENST00000506163 BCKDKO14874 412 aa16.21■□□□□ 0.19
SMN1-204ENST00000506163 EDF1O60869 148 aaKnown RBP16.21■□□□□ 0.19
SMN1-204ENST00000506163 OXSR1O95747 527 aaPredicted RBP16.21■□□□□ 0.19
SMN1-204ENST00000506163 ESRRAP11474 423 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms