RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.4□□□□□ -0.9
DDX41-203ENST00000504781 RFX4Q33E94 735 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 EIPR1Q53HC9 387 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 RPS26P11Q5JNZ5 115 aaPredicted RBP9.4□□□□□ -0.9
DDX41-203ENST00000504781 HLA-DQA1Q5Y7H0 255 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 TCTN3Q6NUS6 607 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 C19orf48Q6RUI8 117 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 C6orf15Q6UXA7 325 aaPredicted RBP9.4□□□□□ -0.9
DDX41-203ENST00000504781 SLC29A4Q7RTT9 530 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 CPEB2Q7Z5Q1 589 aaKnown RBP9.4□□□□□ -0.9
DDX41-203ENST00000504781 TSEN54Q7Z6J9 526 aaKnown RBP9.4□□□□□ -0.9
DDX41-203ENST00000504781 STK32CQ86UX6 486 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 GRAMD2AQ8IUY3 354 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 CMIPQ8IY22 773 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 KBTBD2Q8IY47 623 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 CBR4Q8N4T8 237 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 LINC00471Q8N535 108 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 OR8K3Q8NH51 312 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 WDR36Q8NI36 951 aaKnown RBP9.4□□□□□ -0.9
DDX41-203ENST00000504781 SLC2A12Q8TD20 617 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 DOK4Q8TEW6 326 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 MR1Q95460 341 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 TSLPQ969D9 159 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 SLC35B4Q969S0 331 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 ADIPOR1Q96A54 375 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 ZG16BQ96DA0 208 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 HSPBAP1Q96EW2 488 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 LCORQ96JN0 433 aaPredicted RBP9.4□□□□□ -0.9
DDX41-203ENST00000504781 RBM4BQ9BQ04 359 aaKnown RBP9.4□□□□□ -0.9
DDX41-203ENST00000504781 RBM4Q9BWF3 364 aaKnown RBP9.4□□□□□ -0.9
DDX41-203ENST00000504781 POLR2J2Q9GZM3 115 aaKnown RBP9.4□□□□□ -0.9
DDX41-203ENST00000504781 POLR2J3Q9H1A7 115 aaKnown RBP9.4□□□□□ -0.9
DDX41-203ENST00000504781 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.4□□□□□ -0.9
DDX41-203ENST00000504781 USE1Q9NZ43 259 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 COPS7AQ9UBW8 275 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 C3orf18Q9UK00 162 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 MKLN1Q9UL63 735 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 CBLCQ9ULV8 474 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 ABCG2Q9UNQ0 655 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 PCDHGA10Q9Y5H3 936 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 B3GALT1Q9Y5Z6 326 aa9.4□□□□□ -0.9
DDX41-203ENST00000504781 COL27A1Q8IZC6 1860 aaPredicted RBP9.39□□□□□ -0.91
DDX41-203ENST00000504781 LOC102723996A0A087X1L8 192 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 GXYLT2A0PJZ3 443 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 PRAMEF25A6NGN4 478 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 FRG2CA6NGY1 282 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 SAC3D1A6NKF1 404 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 PDLIM1O00151 329 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 HRKO00198 91 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 TNFRSF11BO00300 401 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 SOCS2O14508 198 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 STK17BO94768 372 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 GADD45GO95257 159 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 NID1P14543 1247 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 ZNF28P17035 718 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 ENDOUP21128 410 aaKnown RBP9.39□□□□□ -0.91
DDX41-203ENST00000504781 ADH7P40394 386 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 ATP12AP54707 1039 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 AQP4P55087 323 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 MED21Q13503 144 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 DAG1Q14118 895 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 GPR68Q15743 365 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 NRF1Q16656 503 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 DECR1Q16698 335 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 LIN52Q52LA3 116 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 NHSL2Q5HYW2 709 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 COLEC12Q5KU26 742 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 LCN10Q6JVE6 187 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 TBPL2Q6SJ96 375 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 DHRS13Q6UX07 377 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 TMPRSS7Q7RTY8 843 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 WDR53Q7Z5U6 358 aaPredicted RBP9.39□□□□□ -0.91
DDX41-203ENST00000504781 TMPRSS12Q86WS5 348 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 CARM1Q86X55 608 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 DHRSXQ8N5I4 330 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 PIK3C3Q8NEB9 887 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 NFAM1Q8NET5 270 aaPredicted RBP9.39□□□□□ -0.91
DDX41-203ENST00000504781 TOR1AIP2Q8NFQ8 470 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 OR5L2Q8NGL0 311 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 MAGEE2Q8TD90 523 aaPredicted RBP9.39□□□□□ -0.91
DDX41-203ENST00000504781 PIK3R3Q92569 461 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 OTUB1Q96FW1 271 aaPredicted RBP9.39□□□□□ -0.91
DDX41-203ENST00000504781 SPSB2Q99619 263 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 LPAR4Q99677 370 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 ARHGDIGQ99819 225 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 CRB3Q9BUF7 120 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 NUDT9Q9BW91 350 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 RSPO3Q9BXY4 272 aaPredicted RBP9.39□□□□□ -0.91
DDX41-203ENST00000504781 OR8D2Q9GZM6 311 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 ACER3Q9NUN7 267 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 KCND3Q9UK17 655 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 ACAD8Q9UKU7 415 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 LHX6Q9UPM6 363 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 LRCH1Q9Y2L9 728 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 SAMHD1Q9Y3Z3 626 aaKnown RBP9.39□□□□□ -0.91
DDX41-203ENST00000504781 OR10H1Q9Y4A9 318 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 CFAP47Q6ZTR5 3102 aa9.39□□□□□ -0.91
DDX41-203ENST00000504781 C7orf72A4D263 438 aa9.38□□□□□ -0.91
DDX41-203ENST00000504781 SAGE2PA6NJ88 616 aa9.38□□□□□ -0.91
DDX41-203ENST00000504781 NPIPB9F8W1W9 429 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms