RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 RPH3AQ9Y2J0 694 aaPredicted RBP7.69□□□□□ -1.18
HMGXB4-207ENST00000498212 V9GYY5 206 aaPredicted RBP7.69□□□□□ -1.18
HMGXB4-207ENST00000498212 NOTCH2Q04721 2471 aa7.69□□□□□ -1.18
HMGXB4-207ENST00000498212 LRBAP50851 2863 aa7.69□□□□□ -1.18
HMGXB4-207ENST00000498212 CSMD2Q7Z408 3487 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 MPDZO75970 2070 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 GXYLT2A0PJZ3 443 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 CLCA1A8K7I4 914 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 C17orf51A8MQB3 221 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 B4DXG7 233 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 EEF1E1-BLOC1S5C9J1V9 151 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 EEF1E1O43324 174 aaKnown RBP7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 TYROBPO43914 113 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 ZIC3O60481 467 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 PEX11AO75192 247 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 SKAP2O75563 359 aaPredicted RBP7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 RCBTB2O95199 551 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 UTS2O95399 124 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 IL18BPO95998 194 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 BPGMP07738 259 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 BCKDHAP12694 445 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 ZNF708P17019 499 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 HK1P19367 917 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 TCEA1P23193 301 aaKnown RBP7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 GABRA3P34903 492 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 OPRM1P35372 400 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 RPL3P39023 403 aaKnown RBP7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 ETV4P43268 484 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 KIR2DL3P43628 341 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 STX5Q13190 355 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 GANABQ14697 944 aaKnown RBP7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 KRT71Q3SY84 523 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 FBXL19-AS1Q494R0 122 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 VPS26BQ4G0F5 336 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 ATP6AP1LQ52LC2 224 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 XKR7Q5GH72 579 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 LRIG3Q6UXM1 1119 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 ADGRE4PQ86SQ3 457 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 ZZZ3Q8IYH5 903 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 MREGQ8N565 214 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 FADS6Q8N9I5 356 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 CDRT4Q8N9R6 151 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 OR2M3Q8NG83 312 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 GPR151Q8TDV0 419 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 PIK3R3Q92569 461 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 SLC9A6Q92581 669 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 HOXB13Q92826 284 aaPredicted RBP7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 RMND5BQ96G75 393 aaPredicted RBP7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 MS4A4EQ96PG1 132 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 UCN2Q96RP3 112 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 TM9SF2Q99805 663 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 TMEM109Q9BVC6 243 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 TBL1XR1Q9BZK7 514 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 RTN4RQ9BZR6 473 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 ACBD3Q9H3P7 528 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 DSN1Q9H410 356 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 PTGES2Q9H7Z7 377 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 FAM120CQ9NX05 1096 aaKnown RBP7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 MED11Q9P086 117 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 NTMQ9P121 344 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 CLCF1Q9UBD9 225 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 GIMAP2Q9UG22 337 aa7.68□□□□□ -1.18
HMGXB4-207ENST00000498212 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 A0A1W2PRB8 838 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 SCAMP2O15127 329 aaKnown RBP7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 CTIFO43310 598 aaKnown RBP7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 EMC8O43402 210 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 ZNF500O60304 480 aaPredicted RBP7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 NKX2-2O95096 273 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 ANGPTL1O95841 491 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 IGKV1D-16P01601 117 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 ACP2P11117 423 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 PEPDP12955 493 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 EFNA1P20827 205 aaPredicted RBP7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 ARRB2P32121 409 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 HPCAL1P37235 193 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 MAP3K8P41279 467 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 CLDN18P56856 261 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 B3GALT5-AS1P59052 145 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 PRR5P85299 388 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 C17orf67Q0P5P2 114 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 MLC1Q15049 377 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 BCL2A1Q16548 175 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 GRAMD1BQ3KR37 738 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 FLYWCH1Q4VC44 716 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 C6orf136Q5SQH8 315 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 RAET1LQ5VY80 246 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 ZCCHC12Q6PEW1 402 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 PLXDC2Q6UX71 529 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 CHMP1BQ7LBR1 199 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 P4HA3Q7Z4N8 544 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 MARCH3Q86UD3 253 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 KIF18BQ86Y91 864 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 GRAMD2AQ8IUY3 354 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 NUDCD3Q8IVD9 361 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 UBQLNLQ8IYU4 475 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 GCNT2Q8N0V5 402 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 FNDC5Q8NAU1 212 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 OR7A2PQ8NGA2 310 aa7.67□□□□□ -1.18
HMGXB4-207ENST00000498212 OR6Y1Q8NGX8 325 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms