RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 LRRD1A4D1F6 860 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 TMEM110-MUSTN1A8MSY1 372 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 H3BMH7 237 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 K7ENP7 123 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 SNAI2O43623 268 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 FOXH1O75593 365 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 SCRG1O75711 98 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 SUPT7LO94864 414 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 ANP32DO95626 131 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 AREGP15514 252 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF18P17022 549 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 HOXD10P28358 340 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 CTNNA1P35221 906 aaKnown RBP1.9□□□□□ -2.11
VPS26A-208ENST00000497022 CNN1P51911 297 aaKnown RBP1.9□□□□□ -2.11
VPS26A-208ENST00000497022 KIAA1024LP59773 190 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 TIMM10P62072 90 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 ACSF3Q4G176 576 aaPredicted RBP1.9□□□□□ -2.11
VPS26A-208ENST00000497022 BEND6Q5SZJ8 279 aaPredicted RBP1.9□□□□□ -2.11
VPS26A-208ENST00000497022 PNCKQ6P2M8 343 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 TMEM110Q86TL2 294 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 SYVN1Q86TM6 617 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 YRDCQ86U90 279 aaKnown RBP1.9□□□□□ -2.11
VPS26A-208ENST00000497022 GPBP1Q86WP2 473 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 ALLCQ8N6M5 410 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 ZBTB44Q8NCP5 570 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF397Q8NF99 534 aaPredicted RBP1.9□□□□□ -2.11
VPS26A-208ENST00000497022 KIR2DL5BQ8NHK3 375 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 ARNTL2Q8WYA1 636 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 DCUN1D4Q92564 292 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 PSMG2Q969U7 264 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 CCDC51Q96ER9 411 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 JAKMIP1Q96N16 626 aaKnown RBP1.9□□□□□ -2.11
VPS26A-208ENST00000497022 CTRCQ99895 268 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 RTBDNQ9BSG5 229 aaPredicted RBP1.9□□□□□ -2.11
VPS26A-208ENST00000497022 SLC5A7Q9GZV3 580 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 RSPH9Q9H1X1 276 aaPredicted RBP1.9□□□□□ -2.11
VPS26A-208ENST00000497022 NAP1L2Q9ULW6 460 aaPredicted RBP1.9□□□□□ -2.11
VPS26A-208ENST00000497022 FZR1Q9UM11 496 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 THSD7BQ9C0I4 1608 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 PCM1Q15154 2024 aa1.9□□□□□ -2.11
VPS26A-208ENST00000497022 PARD3Q8TEW0 1356 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 CCDC69A6NI79 296 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 TM9SF1O15321 606 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 TGDSO95455 350 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 MARCKSP29966 332 aaPredicted RBP1.89□□□□□ -2.11
VPS26A-208ENST00000497022 NUP107P57740 925 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 BTG3Q14201 252 aaPredicted RBP1.89□□□□□ -2.11
VPS26A-208ENST00000497022 LRRC36Q1X8D7 754 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 TEX44Q53QW1 395 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 PRAMEF7Q5VXH5 474 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 LEG1Q6P5S2 330 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF589Q86UQ0 364 aaPredicted RBP1.89□□□□□ -2.11
VPS26A-208ENST00000497022 PEX5LQ8IYB4 626 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF561Q8N587 486 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 ARIH2OSQ8N7S6 290 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 GPATCH11Q8N954 259 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 C7orf33Q8WU49 177 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 TAF4BQ92750 862 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 TMEM80Q96HE8 168 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 CBWD1Q9BRT8 395 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 NDUFAF3Q9BU61 184 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 DUS2Q9NX74 493 aaKnown RBP1.89□□□□□ -2.11
VPS26A-208ENST00000497022 CD274Q9NZQ7 290 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 SPRR3Q9UBC9 169 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 LCMT1Q9UIC8 334 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 PRG3Q9Y2Y8 225 aaPredicted RBP1.89□□□□□ -2.11
VPS26A-208ENST00000497022 EXOSC1Q9Y3B2 195 aaKnown RBP1.89□□□□□ -2.11
VPS26A-208ENST00000497022 CACNG2Q9Y698 323 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 WSB1Q9Y6I7 421 aa1.89□□□□□ -2.11
VPS26A-208ENST00000497022 PLEKHG1Q9ULL1 1385 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 C19orf81C9J6K1 198 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 ANKRD63C9JTQ0 380 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 IMPA2O14732 288 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 CD55P08174 381 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 OR8U8P0C7N1 319 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 HTR1FP30939 366 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 TNNT3P45378 269 aaPredicted RBP1.88□□□□□ -2.11
VPS26A-208ENST00000497022 RPS10P46783 165 aaKnown RBP1.88□□□□□ -2.11
VPS26A-208ENST00000497022 MRPS11P82912 194 aaKnown RBP1.88□□□□□ -2.11
VPS26A-208ENST00000497022 NME3Q13232 169 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 TSTA3Q13630 321 aaPredicted RBP1.88□□□□□ -2.11
VPS26A-208ENST00000497022 DPYSL3Q14195 570 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 SHHQ15465 462 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 PKN2Q16513 984 aaKnown RBP1.88□□□□□ -2.11
VPS26A-208ENST00000497022 AANATQ16613 207 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 PARP6Q2NL67 630 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 SMU1Q2TAY7 513 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 CYBRD1Q53TN4 286 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF410Q86VK4 478 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 CCDC36Q8IYA8 594 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 OR2A12Q8NGT7 310 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 MARCH1Q8TCQ1 289 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 ZNF721Q8TF20 911 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 ART4Q93070 314 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 MYDGFQ969H8 173 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 ATP6V1E2Q96A05 226 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 TMEM101Q96IK0 257 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 NXF3Q9H4D5 531 aaKnown RBP1.88□□□□□ -2.11
VPS26A-208ENST00000497022 NTN4Q9HB63 628 aa1.88□□□□□ -2.11
VPS26A-208ENST00000497022 APMAPQ9HDC9 416 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms