RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 SRSF1Q07955 248 aaKnown RBP eCLIP17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 C3AR1Q16581 482 aa17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 FNDC7Q5VTL7 733 aa17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 C6orf120Q7Z4R8 191 aa17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 GOT1L1Q8NHS2 421 aaPredicted RBP17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 NEIL3Q8TAT5 605 aa17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 FAM110BQ8TC76 370 aa17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 MARK4Q96L34 752 aa17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 GNRHR2Q96P88 292 aa17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 UBQLN3Q9H347 655 aa17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 TMEM45AQ9NWC5 275 aa17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 PPP4R1LQ9P1A2 415 aa17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 SH3BGRL2Q9UJC5 107 aa17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 TRIM33Q9UPN9 1127 aa17.58■□□□□ 0.4
CTDSP1-213ENST00000496785 SCO2O43819 266 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 FADS1O60427 444 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 LDLRP01130 860 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 TROVE2P10155 538 aaKnown RBP eCLIP17.57■□□□□ 0.45e-6■□□□□ 9.7
CTDSP1-213ENST00000496785 MATN1P21941 496 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 IL12AP29459 219 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 CHI3L1P36222 383 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 DGKQP52824 942 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 PHC1P78364 1004 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 WLSQ5T9L3 541 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 CD163Q86VB7 1156 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 CHERPQ8IWX8 916 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 MIPOL1Q8TD10 442 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 CDS1Q92903 461 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 EBF4Q9BQW3 602 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 HOXD1Q9GZZ0 328 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 TP63Q9H3D4 680 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 RABEP2Q9H5N1 569 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 EXD2Q9NVH0 621 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 TINAGQ9UJW2 476 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 LIPGQ9Y5X9 500 aa17.57■□□□□ 0.4
CTDSP1-213ENST00000496785 FAM234BA2RU67 622 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 FIGNL2A6NMB9 653 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 NPIPA2E9PIF3 369 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 E9PLN8 166 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 NPIPA3F8WFD2 350 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 RFXANKO14593 260 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 CELA3AP09093 270 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 ATP4BP51164 291 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 POLR2JP52435 117 aaKnown RBP17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 DCST2Q5T1A1 773 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 ATAD3BQ5T9A4 648 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 FIGNL1Q6PIW4 674 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 RPTNQ6XPR3 784 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 FGD2Q7Z6J4 655 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 ZNF527Q8NB42 609 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 OR4K17Q8NGC6 315 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 NEURL3Q96EH8 262 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 OR7D2Q96RA2 312 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 VKORC1Q9BQB6 163 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 SLC35A5Q9BS91 424 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 PTGES2Q9H7Z7 377 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 UBQLN4Q9NRR5 601 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 MRGBPQ9NV56 204 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 ACAD8Q9UKU7 415 aa17.56■□□□□ 0.4
CTDSP1-213ENST00000496785 C2orf72A6NCS6 295 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 C9JVG2 144 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 SCDO00767 359 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 IGKV1D-16P01601 117 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 SRD5A2P31213 254 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 KHKP50053 298 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 GAS1P54826 345 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 C17orf67Q0P5P2 114 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 GANABQ14697 944 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 SAXO2Q658L1 398 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 DOLPP1Q86YN1 238 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 MISPQ8IVT2 679 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 WDSUB1Q8N9V3 476 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 PHF10Q8WUB8 498 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 OTUB1Q96FW1 271 aaPredicted RBP17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 ITCHQ96J02 903 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 SLC6A15Q9H2J7 730 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 NPHS2Q9NP85 383 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 SERHLQ9NQF3 203 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 DKKL1Q9UK85 242 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 NINQ8N4C6 2090 aa17.55■□□□□ 0.4
CTDSP1-213ENST00000496785 C15orf38-AP3S2A0A0A6YYH1 394 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 A0A1W2PQD3 144 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 WIPF3A6NGB9 483 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 CCDC154A6NI56 674 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 ALG1L2C9J202 215 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 WDR1O75083 606 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 ANP32DO95626 131 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 KRT75O95678 551 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 OXSR1O95747 527 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 ANGPTL1O95841 491 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 HOXD4P09016 255 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 GABRA1P14867 456 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 TBXA2RP21731 343 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 MAGEA8P43361 318 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 TRPC1P48995 793 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 SMSP52788 366 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 SQLEQ14534 574 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 SF3B4Q15427 424 aaKnown RBP eCLIP17.54■□□□□ 0.49e-8■■□□□ 12.6
CTDSP1-213ENST00000496785 GRAMD1BQ3KR37 738 aa17.54■□□□□ 0.4
CTDSP1-213ENST00000496785 TIGD2Q4W5G0 525 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms