RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 GABRA3P34903 492 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 ASMTP46597 345 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 CPA2P48052 419 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 ART1P52961 327 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 PRKAG1P54619 331 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 MANFP55145 182 aaKnown RBP7.48□□□□□ -1.21
LSM2-213ENST00000491421 CLDN18P56856 261 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 B3GALT5-AS1P59052 145 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 SORDQ00796 357 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 PDE7AQ13946 482 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 GANABQ14697 944 aaKnown RBP7.48□□□□□ -1.21
LSM2-213ENST00000491421 BCL2A1Q16548 175 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 VPS26BQ4G0F5 336 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 RFTN2Q52LD8 501 aaPredicted RBP7.48□□□□□ -1.21
LSM2-213ENST00000491421 ZNF385BQ569K4 471 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 ARL13AQ5H913 290 aaPredicted RBP7.48□□□□□ -1.21
LSM2-213ENST00000491421 SPNS3Q6ZMD2 512 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 CHMP1BQ7LBR1 199 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 MARCH3Q86UD3 253 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 GRAMD2AQ8IUY3 354 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 UBQLNLQ8IYU4 475 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 GCNT2Q8N0V5 402 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 FADS6Q8N9I5 356 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 OR2M3Q8NG83 312 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 FBXO30Q8TB52 745 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 AGR3Q8TD06 166 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 TCP10LQ8TDR4 215 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 GPR151Q8TDV0 419 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 TWIST2Q8WVJ9 160 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 INTS12Q96CB8 462 aaKnown RBP7.48□□□□□ -1.21
LSM2-213ENST00000491421 RMND5BQ96G75 393 aaPredicted RBP7.48□□□□□ -1.21
LSM2-213ENST00000491421 UCN2Q96RP3 112 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 G6PC3Q9BUM1 346 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 MECRQ9BV79 373 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 RBM24Q9BX46 236 aaKnown RBP7.48□□□□□ -1.21
LSM2-213ENST00000491421 TBL1XR1Q9BZK7 514 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 RTN4RQ9BZR6 473 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 PTGES2Q9H7Z7 377 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 RASSF1Q9NS23 344 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 ACSS1Q9NUB1 689 aaPredicted RBP7.48□□□□□ -1.21
LSM2-213ENST00000491421 JKAMPQ9P055 326 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 MED11Q9P086 117 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 SH3BP4Q9P0V3 963 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 SLC17A7Q9P2U7 560 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 CLCF1Q9UBD9 225 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 BAIAP2L1Q9UHR4 511 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 LGALS13Q9UHV8 139 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 TRAF6Q9Y4K3 522 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 NCKAP5O14513 1909 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 F8P00451 2351 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 SLC22A20A6NK97 555 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 TMEM114B3SHH9 223 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 LINC01387J3KSC0 135 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 HCRTR2O43614 444 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 GMFGO60234 142 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 PEX11AO75192 247 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 IGKV1D-16P01601 117 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 FGF4P08620 206 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 BCKDHAP12694 445 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 PEPDP12955 493 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 DDX5P17844 614 aaKnown RBP7.47□□□□□ -1.21
LSM2-213ENST00000491421 EFNA1P20827 205 aaPredicted RBP7.47□□□□□ -1.21
LSM2-213ENST00000491421 MAPK1P28482 360 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 SERPINB5P36952 375 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 HPCAL1P37235 193 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 FRKP42685 505 aaPredicted RBP7.47□□□□□ -1.21
LSM2-213ENST00000491421 DIO3P55073 304 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 EEFSECP57772 596 aaKnown RBP7.47□□□□□ -1.21
LSM2-213ENST00000491421 EEF1A1P68104 462 aaKnown RBP7.47□□□□□ -1.21
LSM2-213ENST00000491421 C17orf67Q0P5P2 114 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 GRAMD1BQ3KR37 738 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 UGT3A2Q3SY77 523 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 ATP6AP1LQ52LC2 224 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 EEF1A1P5Q5VTE0 462 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 FBXW10Q5XX13 1052 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 EMBQ6PCB8 327 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 LRIG3Q6UXM1 1119 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 ZCCHC23Q6ZST2 131 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 P4HA3Q7Z4N8 544 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 R3HCC1LQ7Z5L2 792 aaKnown RBP7.47□□□□□ -1.21
LSM2-213ENST00000491421 GALNT10Q86SR1 603 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 LUZP2Q86TE4 346 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 EXOC3L1Q86VI1 746 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 MEIOBQ8N635 442 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 CDRT4Q8N9R6 151 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 NUP43Q8NFH3 380 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 CEP70Q8NHQ1 597 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 GOT1L1Q8NHS2 421 aaPredicted RBP7.47□□□□□ -1.21
LSM2-213ENST00000491421 LINC01560Q8TB33 94 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 AENQ8WTP8 325 aaKnown RBP7.47□□□□□ -1.21
LSM2-213ENST00000491421 DUSP19Q8WTR2 217 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 PIK3R3Q92569 461 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 SLC9A6Q92581 669 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 MTERF3Q96E29 417 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 C1GALT1C1Q96EU7 318 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 PPP3R2Q96LZ3 170 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 MS4A4EQ96PG1 132 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 PIGQQ9BRB3 760 aa7.47□□□□□ -1.21
LSM2-213ENST00000491421 ROPN1BQ9BZX4 212 aaPredicted RBP7.47□□□□□ -1.21
LSM2-213ENST00000491421 PIGMQ9H3S5 423 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms