RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 UTS2O95399 124 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 ZIC2O95409 532 aaPredicted RBP13.75□□□□□ -0.21
CXCL12-207ENST00000488591 HPGDP15428 266 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 ATP6V1C1P21283 382 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 MATN1P21941 496 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 PTPN6P29350 595 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 GCKP35557 465 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 CHI3L1P36222 383 aaPredicted RBP13.75□□□□□ -0.21
CXCL12-207ENST00000488591 POLR2JP52435 117 aaKnown RBP13.75□□□□□ -0.21
CXCL12-207ENST00000488591 IRX1P78414 480 aaPredicted RBP13.75□□□□□ -0.21
CXCL12-207ENST00000488591 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.75□□□□□ -0.21
CXCL12-207ENST00000488591 FNDC7Q5VTL7 733 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 FIGNL1Q6PIW4 674 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 PLCZ1Q86YW0 608 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 FAM110BQ8TC76 370 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 CDS1Q92903 461 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 OTUB1Q96FW1 271 aaPredicted RBP13.75□□□□□ -0.21
CXCL12-207ENST00000488591 SLC35G5Q96KT7 338 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 UBQLN3Q9H347 655 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 RMND5AQ9H871 391 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 NPHS2Q9NP85 383 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 PPP4R1LQ9P1A2 415 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 TINAGQ9UJW2 476 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 LIPGQ9Y5X9 500 aa13.75□□□□□ -0.21
CXCL12-207ENST00000488591 FAM234BA2RU67 622 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 NPIPA2E9PIF3 369 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 NPIPA3F8WFD2 350 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 ZNHIT1O43257 154 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 AGR2O95994 175 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 IGKV1D-16P01601 117 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 HPNP05981 417 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 ANXA11P50995 505 aaKnown RBP13.74□□□□□ -0.21
CXCL12-207ENST00000488591 EXOSC6Q5RKV6 272 aaKnown RBP13.74□□□□□ -0.21
CXCL12-207ENST00000488591 ZNF621Q6ZSS3 439 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 MSANTD1Q6ZTZ1 278 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 FGD2Q7Z6J4 655 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 DOLPP1Q86YN1 238 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 CHERPQ8IWX8 916 aaKnown RBP13.74□□□□□ -0.21
CXCL12-207ENST00000488591 WDSUB1Q8N9V3 476 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 GOT1L1Q8NHS2 421 aaPredicted RBP13.74□□□□□ -0.21
CXCL12-207ENST00000488591 NEIL3Q8TAT5 605 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 RNF138Q8WVD3 245 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 STON2Q8WXE9 905 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 THOC1Q96FV9 657 aaKnown RBP13.74□□□□□ -0.21
CXCL12-207ENST00000488591 OR7D2Q96RA2 312 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 SLC35A5Q9BS91 424 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 SERHLQ9NQF3 203 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 UBQLN4Q9NRR5 601 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 EXD2Q9NVH0 621 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 ACAD8Q9UKU7 415 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 TRIM33Q9UPN9 1127 aa13.74□□□□□ -0.21
CXCL12-207ENST00000488591 GTF3C1Q12789 2109 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 HIVEP3Q5T1R4 2406 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 CCDC154A6NI56 674 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 RFXANKO14593 260 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 ANP32DO95626 131 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 AK1P00568 194 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 LDLRP01130 860 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 NGFRP08138 427 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 VIMP08670 466 aaKnown RBP13.73□□□□□ -0.21
CXCL12-207ENST00000488591 TROVE2P10155 538 aaKnown RBP eCLIP13.73□□□□□ -0.21
CXCL12-207ENST00000488591 TRPC1P48995 793 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 MRPL19P49406 292 aaKnown RBP13.73□□□□□ -0.21
CXCL12-207ENST00000488591 GAS1P54826 345 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 C17orf67Q0P5P2 114 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 GRAMD1BQ3KR37 738 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 CCNJQ5T5M9 372 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 WLSQ5T9L3 541 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 OR5M10Q6IEU7 315 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 GALNT10Q86SR1 603 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 MARCH3Q86UD3 253 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 CD163Q86VB7 1156 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 CLEC4FQ8N1N0 589 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 OR4K17Q8NGC6 315 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 OR14L1PQ8NHC6 308 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 NEURL3Q96EH8 262 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 ITCHQ96J02 903 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 HOXD1Q9GZZ0 328 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 SLC6A15Q9H2J7 730 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 TP63Q9H3D4 680 aaPredicted RBP13.73□□□□□ -0.21
CXCL12-207ENST00000488591 RABEP2Q9H5N1 569 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 PTGES2Q9H7Z7 377 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 FLRT3Q9NZU0 649 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 DCTN4Q9UJW0 460 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 MEMO1Q9Y316 297 aa13.73□□□□□ -0.21
CXCL12-207ENST00000488591 C15orf38-AP3S2A0A0A6YYH1 394 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 A0A0G2JND7 137 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 WIPF3A6NGB9 483 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 E9PLN8 166 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 SCDO00767 359 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 NDUFB5O43674 189 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 ANGPTL1O95841 491 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 NCF2P19878 526 aaPredicted RBP13.72□□□□□ -0.21
CXCL12-207ENST00000488591 TBXA2RP21731 343 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 ATP4BP51164 291 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 RPS26P62854 115 aaKnown RBP13.72□□□□□ -0.21
CXCL12-207ENST00000488591 TXNL4AP83876 142 aaKnown RBP13.72□□□□□ -0.21
CXCL12-207ENST00000488591 GUCY1A3Q02108 690 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 STX5Q13190 355 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 GXYLT1Q4G148 440 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms