RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 HNRNPFP52597 415 aaKnown RBP15.54■□□□□ 0.08
COL7A1-210ENST00000487017 GSG1LQ6UXU4 331 aa15.54■□□□□ 0.08
COL7A1-210ENST00000487017 HSD11B1LQ7Z5J1 315 aa15.54■□□□□ 0.08
COL7A1-210ENST00000487017 MFSD6LQ8IWD5 586 aa15.54■□□□□ 0.08
COL7A1-210ENST00000487017 TCEAL8Q8IYN2 117 aa15.54■□□□□ 0.08
COL7A1-210ENST00000487017 ZNF619Q8N2I2 560 aa15.54■□□□□ 0.08
COL7A1-210ENST00000487017 MUL1Q969V5 352 aa15.54■□□□□ 0.08
COL7A1-210ENST00000487017 NECAB3Q96P71 396 aaPredicted RBP15.54■□□□□ 0.08
COL7A1-210ENST00000487017 SLC17A9Q9BYT1 436 aa15.54■□□□□ 0.08
COL7A1-210ENST00000487017 CLDN24A6NM45 220 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 MORN1Q5T089 497 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 FCRLBQ6BAA4 426 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 DPPA4Q7L190 304 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 LAS2Q8IYD9 372 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 OR2T35Q8NGX2 323 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 ABHD5Q8WTS1 349 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 MAFIPQ8WZ33 124 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 ISG20Q96AZ6 181 aaKnown RBP15.53■□□□□ 0.08
COL7A1-210ENST00000487017 SLC25A44Q96H78 314 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-210ENST00000487017 PEX11GQ96HA9 241 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 RGCCQ9H4X1 137 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 EEF1E1-BLOC1S5C9J1V9 151 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 TMEM189-UBE2V1I3L0A0 370 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 GOSR2O14653 212 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 AKR1C4P17516 323 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 INAVAQ3KP66 663 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 CDRT4Q8N9R6 151 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 GGHQ92820 318 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 BMFQ96LC9 184 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 ATXN7L1Q9ULK2 861 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-210ENST00000487017 GPR34Q9UPC5 381 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 MROH6A6NGR9 719 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 ADH6P28332 368 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 LSSP48449 732 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 SLC26A5P58743 744 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 PRPS1P60891 318 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 WDR5P61964 334 aaKnown RBP15.53■□□□□ 0.08
COL7A1-210ENST00000487017 TP53I3Q53FA7 332 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 OR5D16Q8NGK9 328 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 CNOT9Q92600 299 aaKnown RBP15.53■□□□□ 0.08
COL7A1-210ENST00000487017 SORBS1Q9BX66 1292 aaKnown RBP15.53■□□□□ 0.08
COL7A1-210ENST00000487017 CPEB1Q9BZB8 566 aaKnown RBP15.53■□□□□ 0.08
COL7A1-210ENST00000487017 CRYBG1Q9Y4K1 1723 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 RGPD5Q99666 1765 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 PRAMEF2O60811 474 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 AADACL4Q5VUY2 407 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 METTL11BQ5VVY1 283 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 ARL14Q8N4G2 192 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 TMEM121BQ9BXQ6 578 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-210ENST00000487017 ANTXRLA6NF34 631 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 LATO43561 262 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 SNU13P55769 128 aaKnown RBP15.53■□□□□ 0.08
COL7A1-210ENST00000487017 TAP2Q03519 686 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 RETREG3Q86VR2 466 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 MFSD8Q8NHS3 518 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 MZB1Q8WU39 189 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 FANCFQ9NPI8 374 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 ERVK-19Q9WJR5 959 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 HIF3AQ9Y2N7 669 aa15.53■□□□□ 0.08
COL7A1-210ENST00000487017 TRAV18A0A075B6X5 111 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 NAP1L6A6NFF2 107 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 SC5DO75845 299 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 C21orf33P30042 268 aaPredicted RBP15.52■□□□□ 0.08
COL7A1-210ENST00000487017 SSTR4P31391 388 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 RUNX3Q13761 415 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 FGFBP1Q14512 234 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 LILRA2Q8N149 483 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 PARP16Q8N5Y8 322 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 HOXB13Q92826 284 aaPredicted RBP15.52■□□□□ 0.08
COL7A1-210ENST00000487017 ARHGAP39Q9C0H5 1083 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 SAP130Q9H0E3 1048 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 GABRB3P28472 473 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 CSNK1DP48730 415 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 OR51L1Q8NGJ5 315 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 SCGB1C1Q8TD33 95 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 TMEM239Q8WW34 195 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 SAMD11Q96NU1 681 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 ZFYVE21Q9BQ24 234 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 SLC6A16Q9GZN6 736 aa15.52■□□□□ 0.08
COL7A1-210ENST00000487017 PITHD1Q9GZP4 211 aaPredicted RBP15.52■□□□□ 0.08
COL7A1-210ENST00000487017 NAA50Q9GZZ1 169 aaKnown RBP15.52■□□□□ 0.08
COL7A1-210ENST00000487017 IFNA2P01563 188 aa15.52■□□□□ 0.07
COL7A1-210ENST00000487017 VIPR2P41587 438 aa15.52■□□□□ 0.07
COL7A1-210ENST00000487017 MAVSQ7Z434 540 aa15.52■□□□□ 0.07
COL7A1-210ENST00000487017 TBC1D15Q8TC07 691 aa15.52■□□□□ 0.07
COL7A1-210ENST00000487017 THAP7Q9BT49 309 aaPredicted RBP15.52■□□□□ 0.07
COL7A1-210ENST00000487017 A0A0G2JMP0 313 aa15.52■□□□□ 0.07
COL7A1-210ENST00000487017 GRIN2CQ14957 1233 aa15.52■□□□□ 0.07
COL7A1-210ENST00000487017 PCGF3Q3KNV8 242 aa15.52■□□□□ 0.07
COL7A1-210ENST00000487017 CYB561A3Q8NBI2 242 aa15.52■□□□□ 0.07
COL7A1-210ENST00000487017 OR4M2Q8NGB6 313 aa15.52■□□□□ 0.07
COL7A1-210ENST00000487017 MR1Q95460 341 aa15.52■□□□□ 0.07
COL7A1-210ENST00000487017 S100PBPQ96BU1 408 aa15.52■□□□□ 0.07
COL7A1-210ENST00000487017 DEFB126Q9BYW3 111 aa15.52■□□□□ 0.07
COL7A1-210ENST00000487017 TEX10Q9NXF1 929 aaPredicted RBP15.52■□□□□ 0.07
COL7A1-210ENST00000487017 HMX3A6NHT5 357 aa15.51■□□□□ 0.07
COL7A1-210ENST00000487017 ZBTB42B2RXF5 422 aa15.51■□□□□ 0.07
COL7A1-210ENST00000487017 JUNDP17535 347 aa15.51■□□□□ 0.07
COL7A1-210ENST00000487017 RGRP47804 291 aa15.51■□□□□ 0.07
COL7A1-210ENST00000487017 PLP2Q04941 152 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms