RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 MIEF1Q9NQG6 463 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 PNO1Q9NRX1 252 aaKnown RBP8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 DEPPQ9NTK1 212 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 TAS2R7Q9NYW3 318 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 EHD3Q9NZN3 535 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 SH3BP4Q9P0V3 963 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 ITGB1BP2Q9UKP3 347 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 AURKCQ9UQB9 309 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 PCDHGB6Q9Y5F9 930 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 KLF2Q9Y5W3 355 aaPredicted RBP8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 SPG11Q96JI7 2443 aa8.68□□□□□ -1.02
TMEM39A-208ENST00000486159 A0A0G2JMM0 328 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 TRBV11-1A0A0K0K1C0 115 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 A0A1B0GTH9 108 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 A0A1W2PPB8 328 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 A0A1W2PRS3 328 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 LRIT2A6NDA9 550 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 URADA6NGE7 173 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 KIR3DP1A8MWS1 328 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 G3V3Y1 287 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 PLPP1O14494 284 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 HS6ST1O60243 411 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 NME2P1O60361 137 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF354AO60765 605 aaPredicted RBP8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 SH3BGRLO75368 114 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 PDE9AO76083 593 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 NME2P22392 152 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 MEOX1P50221 254 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 GPR143P51810 404 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 TAS2R50P59544 299 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 TXNL4AP83876 142 aaKnown RBP8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 RBPJQ06330 500 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 RGS1Q08116 209 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 RBBP4Q09028 425 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 FADDQ13158 208 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 SELPLGQ14242 412 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 MLC1Q15049 377 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 ATP6AP1Q15904 470 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 OR4C11Q6IEV9 310 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 PPP4R4Q6NUP7 873 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 DCHS2Q6V1P9 2916 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 QSOX2Q6ZRP7 698 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 ZCCHC7Q8N3Z6 543 aaKnown RBP8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 SLC5A8Q8N695 610 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 FAM47BQ8NA70 645 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 OR52N2Q8NGI0 321 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 CDC26Q8NHZ8 85 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 DOK4Q8TEW6 326 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 LRTOMTQ8WZ04 291 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 OR5P2Q8WZ92 322 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 GFM2Q969S9 779 aaKnown RBP8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 FAM162AQ96A26 154 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 MAGED4Q96JG8 741 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 KCNC2Q96PR1 638 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 OSBPL11Q9BXB4 747 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 OSBPL10Q9BXB5 764 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 TPT1P8Q9HAU6 139 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 NEUROD4Q9HD90 331 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 ACSS1Q9NUB1 689 aaPredicted RBP8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 DCAF13Q9NV06 445 aaKnown RBP8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 RPS6KA6Q9UK32 745 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 FBXW2Q9UKT8 454 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 SAMD4AQ9UPU9 718 aaKnown RBP8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 APCP25054 2843 aa8.67□□□□□ -1.02
TMEM39A-208ENST00000486159 NF1P21359 2839 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 CENPEQ02224 2701 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 A0A0A6YYD5 115 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 A0A1W2PRB8 838 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 C1orf226A1L170 272 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 MAGEA13PA6NCF6 341 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 CDC40O60508 579 aaKnown RBP eCLIP8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 TIPRLO75663 272 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 PRSS23O95084 383 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 CPSF4O95639 269 aaKnown RBP8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 CYC1P08574 325 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 RPSAP08865 295 aaKnown RBP8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 COX6B1P14854 86 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 NCK1P16333 377 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 ABOP16442 354 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 ZNF26P17031 533 aaPredicted RBP8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 FRKP42685 505 aaPredicted RBP8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 CDKN2CP42773 168 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 CYB561P49447 251 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 HLCSP50747 726 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 PLA2G16P53816 162 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 AQP4P55087 323 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 PLIN5Q00G26 463 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 ID2Q02363 134 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 VMACQ2NL98 169 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 KRTCAP3Q53RY4 240 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 TRIM40Q6P9F5 258 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 XKRXQ6PP77 449 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 DNAJC14Q6Y2X3 702 aaPredicted RBP8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 ZBTB49Q6ZSB9 765 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 ABHD13Q7L211 337 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 ANKRD46Q86W74 232 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 TMEM178AQ8NBL3 297 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 OR2L5Q8NG80 312 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 OR4A15Q8NGL6 344 aa8.66□□□□□ -1.02
TMEM39A-208ENST00000486159 ZFP90Q8TF47 636 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms