RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 OR52B2Q96RD2 323 aa16.41■□□□□ 0.22
HDAC6-225ENST00000483506 BTBD2Q9BX70 525 aa16.41■□□□□ 0.22
HDAC6-225ENST00000483506 OR2B2Q9GZK3 357 aa16.41■□□□□ 0.22
HDAC6-225ENST00000483506 PIGUQ9H490 435 aa16.41■□□□□ 0.22
HDAC6-225ENST00000483506 SDR39U1Q9NRG7 319 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-225ENST00000483506 FLRT3Q9NZU0 649 aa16.41■□□□□ 0.22
HDAC6-225ENST00000483506 BTNL2Q9UIR0 455 aa16.41■□□□□ 0.22
HDAC6-225ENST00000483506 MRPS18CQ9Y3D5 142 aaKnown RBP16.41■□□□□ 0.22
HDAC6-225ENST00000483506 PHF3Q92576 2039 aaKnown RBP16.4■□□□□ 0.22
HDAC6-225ENST00000483506 C2orf72A6NCS6 295 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 B4DXG7 233 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 CFLARO15519 480 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 UTS2O95399 124 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 CLDN1O95832 211 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 ESRRAP11474 423 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-225ENST00000483506 GP1BBP13224 206 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 S100A3P33764 101 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 MRPL19P49406 292 aaKnown RBP16.4■□□□□ 0.22
HDAC6-225ENST00000483506 TP53BP2Q13625 1128 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 SPDYE7PQ495Y7 208 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 NXNQ6DKJ4 435 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 ZNF808Q8N4W9 903 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-225ENST00000483506 COX18Q8N8Q8 333 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 FADS6Q8N9I5 356 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 FAM83FQ8NEG4 500 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-225ENST00000483506 FBXO30Q8TB52 745 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 STON2Q8WXE9 905 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 DTNBP1Q96EV8 351 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 CCDC115Q96NT0 180 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 SERHLQ9NQF3 203 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 PNPLA3Q9NST1 481 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 ZIM2Q9NZV7 527 aa16.4■□□□□ 0.22
HDAC6-225ENST00000483506 NBPF19A0A087WUL8 3843 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 IGLV3-32A0A0A0MS00 114 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 FIGNL2A6NMB9 653 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 UBDO15205 165 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 DIAPH2O60879 1101 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 TRAPPC6AO75865 159 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 PGRP06401 933 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 SRD5A2P31213 254 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 POU6F2P78424 691 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-225ENST00000483506 CRYZQ08257 329 aaKnown RBP16.39■□□□□ 0.21
HDAC6-225ENST00000483506 LRRC74AQ0VAA2 488 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 GRAMD1BQ3KR37 738 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 MAMDC2Q7Z304 686 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-225ENST00000483506 OR4A15Q8NGL6 344 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 MIPOL1Q8TD10 442 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 JADE3Q92613 823 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 YIPF4Q9BSR8 244 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 G6PC3Q9BUM1 346 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 RTN4RQ9BZR6 473 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 EXO5Q9H790 373 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 HHATLQ9HCP6 504 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 SDHAF3Q9NRP4 125 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 PLEKHB1Q9UF11 243 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-225ENST00000483506 FBXL2Q9UKC9 423 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 PCDHGB4Q9UN71 923 aa16.39■□□□□ 0.21
HDAC6-225ENST00000483506 FAF1Q9UNN5 650 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-225ENST00000483506 RNF103-CHMP3A0A140T963 221 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 ALG1L2C9J202 215 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 SCO2O43819 266 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 WDR1O75083 606 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 HOXD4P09016 255 aaPredicted RBP16.38■□□□□ 0.21
HDAC6-225ENST00000483506 TBXA2RP21731 343 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 UQCRC2P22695 453 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 ACVR2AP27037 513 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 SOAT1P35610 550 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 ZFP36L2P47974 494 aaKnown RBP16.38■□□□□ 0.21
HDAC6-225ENST00000483506 TRPC1P48995 793 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 SMSP52788 366 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 NME5P56597 212 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 EIPR1Q53HC9 387 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 WLSQ5T9L3 541 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 VASNQ6EMK4 673 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 TMEM211Q6ICI0 200 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 XKRXQ6PP77 449 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 C3P1Q6ZMU1 363 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 ACAD11Q709F0 780 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 C6orf120Q7Z4R8 191 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 ZAR1Q86SH2 424 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 ANKRD46Q86W74 232 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 MARVELD2Q8N4S9 558 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 OR5AK3PQ8NH89 298 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 ADAMTS15Q8TE58 950 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 CDS1Q92903 461 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 ZBTB18Q99592 522 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 CCDC28BQ9BUN5 200 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 PRDM14Q9GZV8 571 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 SERHL2Q9H4I8 314 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 TCF7L2Q9NQB0 619 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 PPP4R1LQ9P1A2 415 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 ACAD8Q9UKU7 415 aa16.38■□□□□ 0.21
HDAC6-225ENST00000483506 SLC22A3O75751 556 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 OXSR1O95747 527 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-225ENST00000483506 IL6P05231 212 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 PTGER4P35408 488 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 RFX3P48380 749 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 CLK3P49761 638 aaKnown RBP16.37■□□□□ 0.21
HDAC6-225ENST00000483506 IDH3AP50213 366 aa16.37■□□□□ 0.21
HDAC6-225ENST00000483506 DGKQP52824 942 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms