RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 PSMB5P28074 263 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 OR1E1P30953 314 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 SLC1A2P43004 574 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 SLC6A8P48029 635 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 MMP15P51511 669 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 KPNA2P52292 529 aaKnown RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 VSNL1P62760 191 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 HERVK_113P63132 956 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ERVK-25P63136 954 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 SP3Q02447 781 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ZNF91Q05481 1191 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 SRSF4Q08170 494 aaKnown RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 CRYZQ08257 329 aaKnown RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 EXOSC2Q13868 293 aaKnown RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 TRIP6Q15654 476 aaKnown RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 EZH2Q15910 746 aaKnown RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 STX1AQ16623 288 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 NSUN5P2Q63ZY6 315 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 SIGIRRQ6IA17 410 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 OR4F3Q6IEY1 312 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 SLC8B1Q6J4K2 584 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 MFSD12Q6NUT3 480 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ZNF793Q6ZN11 406 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 PQLC2Q6ZP29 291 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 PID1Q7Z2X4 250 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ZNF546Q86UE3 836 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ZNF677Q86XU0 584 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 CDK20Q8IZL9 346 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 CMTM8Q8IZV2 173 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 SPEM1Q8N4L4 309 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 STXBP6Q8NFX7 210 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 OR8K1Q8NGG5 319 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 OR1L6Q8NGR2 347 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 PRSS3P2Q8NHM4 247 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 NUBPLQ8TB37 319 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 SPPL2AQ8TCT8 520 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 HM13Q8TCT9 377 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 GIPC3Q8TF64 312 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ACOT11Q8WXI4 607 aaPredicted RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 DDB2Q92466 427 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 PIGTQ969N2 578 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 TMEM45BQ96B21 275 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 PHF21AQ96BD5 680 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 CCDC124Q96CT7 223 aaKnown RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 PELI1Q96FA3 418 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 HPDLQ96IR7 371 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 C3orf30Q96M34 536 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 GLT1D1Q96MS3 346 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 TGM7Q96PF1 710 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ACCSQ96QU6 501 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 OR6C1Q96RD1 312 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 GPR174Q9BXC1 333 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ERVK-6Q9BXR3 956 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 PARD6BQ9BYG5 372 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 FAM107BQ9H098 131 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 LRRN3Q9H3W5 708 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ACTL8Q9H568 366 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ZDHHC6Q9H6R6 413 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 UGT1A10Q9HAW8 530 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 SLC38A10Q9HBR0 1119 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 CDH20Q9HBT6 801 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 LPAR2Q9HBW0 351 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 SPAG4Q9NPE6 437 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ADAP2Q9NPF8 381 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 SAMSN1Q9NSI8 373 aaKnown RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 ZNF701Q9NV72 531 aaPredicted RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 PLEK2Q9NYT0 353 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 MYEF2Q9P2K5 600 aaKnown RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 ABCD2Q9UBJ2 740 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 LRWD1Q9UFC0 647 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 CYB5R1Q9UHQ9 305 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 STARD10Q9Y365 291 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 TMED7Q9Y3B3 224 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 MRPS18BQ9Y676 258 aaKnown RBP3.75□□□□□ -1.81
VPS41-212ENST00000482217 PCSK5Q92824 1860 aa3.75□□□□□ -1.81
VPS41-212ENST00000482217 ATP10AO60312 1499 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 PPIAL4EA0A075B759 164 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 LOC105371242A0A075B767 164 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 A0A1B0GUS0 222 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.74□□□□□ -1.81
VPS41-212ENST00000482217 A8MU76 341 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 A8MUA0 341 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 KCNU1A8MYU2 1149 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 TMEM238C9JI98 176 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 E7EWF7 191 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 M0QXV9 152 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 RNMTO43148 476 aaKnown RBP3.74□□□□□ -1.81
VPS41-212ENST00000482217 DENRO43583 198 aaKnown RBP3.74□□□□□ -1.81
VPS41-212ENST00000482217 IDH3BO43837 385 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 LDB3O75112 727 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 MOCS2O96007 188 aaPredicted RBP3.74□□□□□ -1.81
VPS41-212ENST00000482217 ACTL6AO96019 429 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 KRT7P08729 469 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 GNAO1P09471 354 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 CT62P0C5K7 136 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 UBCP0CG48 685 aaKnown RBP3.74□□□□□ -1.81
VPS41-212ENST00000482217 PPIAL4FP0DN26 164 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 ETFAP13804 333 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 SRD5A1P18405 259 aa3.74□□□□□ -1.81
VPS41-212ENST00000482217 POLR2EP19388 210 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms