RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 DSCR9P59020 149 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 VLDLRP98155 873 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 DR1Q01658 176 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 IFT88Q13099 833 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 TSC22D1Q15714 1073 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 ZNF628Q5EBL2 1059 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 GRTP1Q5TC63 336 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 CLEC2AQ6UVW9 174 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 COMMD6Q7Z4G1 85 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 GGNQ86UU5 652 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 CTAGE3PQ8IX95 158 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 KLHL7Q8IXQ5 586 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 ZNF619Q8N2I2 560 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 KBTBD8Q8NFY9 601 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 OR10H5Q8NGA6 315 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 OR10D3Q8NH80 312 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 KAT2AQ92830 837 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 ERP27Q96DN0 273 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 ADAD1Q96M93 576 aaKnown RBP11.93□□□□□ -0.5
NDC1-202ENST00000480952 VSTM2LQ96N03 204 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 TRIM31Q9BZY9 425 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 PAQR5Q9NXK6 330 aaPredicted RBP11.93□□□□□ -0.5
NDC1-202ENST00000480952 CISD1Q9NZ45 108 aaKnown RBP11.93□□□□□ -0.5
NDC1-202ENST00000480952 XPR1Q9UBH6 696 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 UTS2RQ9UKP6 389 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 B3GALT5Q9Y2C3 310 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 TNPO3Q9Y5L0 923 aaKnown RBP11.93□□□□□ -0.5
NDC1-202ENST00000480952 SHISA8B8ZZ34 492 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 GMFGO60234 142 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 FADS1O60427 444 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 SIX3O95343 332 aaPredicted RBP11.92□□□□□ -0.5
NDC1-202ENST00000480952 ESRRBO95718 433 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 TUBBP07437 444 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 CCNG1P51959 295 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 BSPH1Q075Z2 132 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 LOXL1Q08397 574 aaPredicted RBP11.92□□□□□ -0.5
NDC1-202ENST00000480952 TAB1Q15750 504 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 SH2D4BQ5SQS7 431 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 GTF2IRD2BQ6EKJ0 949 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 FIGNL1Q6PIW4 674 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 ATG4DQ86TL0 474 aaPredicted RBP11.92□□□□□ -0.5
NDC1-202ENST00000480952 GTF2IRD2Q86UP8 949 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 EXOC3L1Q86VI1 746 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 GAS2L3Q86XJ1 694 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 WDR75Q8IWA0 830 aaKnown RBP11.92□□□□□ -0.5
NDC1-202ENST00000480952 PIP4P2Q8N4L2 257 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 ARIH2OSQ8N7S6 290 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 OR9A2Q8NGT5 310 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 RHEBL1Q8TAI7 183 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 ZNF675Q8TD23 568 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 ROBO4Q8WZ75 1007 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 TRIM2Q9C040 744 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 GRIP2Q9C0E4 1043 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 FBXO34Q9NWN3 711 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 TAS2R9Q9NYW1 312 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 ABCG2Q9UNQ0 655 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 SLC12A4Q9UP95 1085 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 PPP2R2CQ9Y2T4 447 aa11.92□□□□□ -0.5
NDC1-202ENST00000480952 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.92□□□□□ -0.57e-9■■■■■ 32.2
NDC1-202ENST00000480952 A0A096LNT2 108 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 TCRBV9S1A1TA0A576 114 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 DPRXA6NFQ7 191 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 OR7A17O14581 309 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 TP73O15350 636 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 CXCL13O43927 109 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 LMX1BO60663 402 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 OPN1LWP04000 364 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 PTNP21246 168 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 FAM83EQ2M2I3 478 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 SFRP5Q5T4F7 317 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 LIPNQ5VXI9 398 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 MFSD12Q6NUT3 480 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 C3orf62Q6ZUJ4 267 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 MARCH3Q86UD3 253 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 CEP112Q8N8E3 955 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 KCTD4Q8WVF5 259 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 MTBPQ96DY7 904 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 RTN4RQ9BZR6 473 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 ELOVL6Q9H5J4 265 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 FLRT3Q9NZU0 649 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 SENP1Q9P0U3 644 aa11.91□□□□□ -0.5
NDC1-202ENST00000480952 CPSF2Q9P2I0 782 aaKnown RBP11.91□□□□□ -0.5
NDC1-202ENST00000480952 FAM159BA6NKW6 160 aa11.9□□□□□ -0.5
NDC1-202ENST00000480952 ELOA3DA6NLF2 546 aaPredicted RBP11.9□□□□□ -0.5
NDC1-202ENST00000480952 NDUFB5O43674 189 aa11.9□□□□□ -0.5
NDC1-202ENST00000480952 RAMP1O60894 148 aa11.9□□□□□ -0.5
NDC1-202ENST00000480952 GCM2O75603 506 aaPredicted RBP11.9□□□□□ -0.5
NDC1-202ENST00000480952 NTN1O95631 604 aa11.9□□□□□ -0.5
NDC1-202ENST00000480952 SLC25A16P16260 332 aa11.9□□□□□ -0.5
NDC1-202ENST00000480952 ZNF16P17020 682 aaPredicted RBP11.9□□□□□ -0.5
NDC1-202ENST00000480952 AGTR1P30556 359 aa11.9□□□□□ -0.5
NDC1-202ENST00000480952 C21orf58P58505 322 aa11.9□□□□□ -0.5
NDC1-202ENST00000480952 TRA2BP62995 288 aaKnown RBP11.9□□□□□ -0.5
NDC1-202ENST00000480952 C17orf67Q0P5P2 114 aa11.9□□□□□ -0.5
NDC1-202ENST00000480952 GALNT1Q10472 559 aaPredicted RBP11.9□□□□□ -0.5
NDC1-202ENST00000480952 ZNF155Q12901 538 aaPredicted RBP11.9□□□□□ -0.5
NDC1-202ENST00000480952 TMEM44Q2T9K0 475 aa11.9□□□□□ -0.5
NDC1-202ENST00000480952 ELOA3BQ3SY89 546 aa11.9□□□□□ -0.5
NDC1-202ENST00000480952 CYP27C1Q4G0S4 372 aa11.9□□□□□ -0.5
NDC1-202ENST00000480952 AGAP6Q5VW22 663 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms