RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SCLYQ96I15 445 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ZNF395Q9H8N7 513 aaPredicted RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 C14orf119Q9NWQ9 140 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ZNF346Q9UL40 294 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 PYCARDQ9ULZ3 195 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ASXL2Q76L83 1435 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 FAM149AA5PLN7 773 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 M0R143 59 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 FZD7O75084 574 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ZNF217O75362 1048 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SULT1C4O75897 302 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 FCGR2AP12318 317 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 NME2P22392 152 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CD34P28906 385 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 PTGER3P43115 390 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CHRNA4P43681 627 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 GDF10P55107 478 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CTXN1P60606 82 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 HERVK_113P63132 956 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ERVK-8P63133 956 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SUMO1P63165 101 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 OLIG2Q13516 323 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 KCNAB1Q14722 419 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 TTC32Q5I0X7 151 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 KHDC1LQ5JSQ8 128 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 MS4A15Q8N5U1 240 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 OR10A7Q8NGE5 316 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 RTP4Q96DX8 246 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ZNF641Q96N77 438 aaPredicted RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 ZIM3Q96PE6 472 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ERVK-6Q9BXR3 956 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 DEFB126Q9BYW3 111 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 NXF5Q9H1B4 397 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 EDA2RQ9HAV5 297 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SIRT7Q9NRC8 400 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 TMLHEQ9NVH6 421 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SLX4Q8IY92 1834 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ABCA9Q8IUA7 1624 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SCN3AQ9NY46 2000 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 IQGAP3Q86VI3 1631 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SLC22A31A6NKX4 558 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 I6L893 689 aaPredicted RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 MRPS14O60783 128 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 PRAMEF4O60810 478 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SPDEFO95238 335 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 OPN1SWP03999 348 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 PCCBP05166 539 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 RAP2AP10114 183 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 TYRP14679 529 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 OMGP23515 440 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 NPY1RP25929 384 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 OR3A1P47881 315 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 GZMKP49863 264 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 RAP2BP61225 183 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CNTN2Q02246 1040 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ZNF211Q13398 564 aaPredicted RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 DAG1Q14118 895 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SERTAD2Q14140 314 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 IRF4Q15306 451 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 TAF1AQ15573 450 aaPredicted RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 DGAT2L7PQ6IED9 249 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SHC4Q6S5L8 630 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 VASH2Q86V25 355 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 OR5D14Q8NGL3 314 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 LRRN4Q8WUT4 740 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 MBD3L1Q8WWY6 194 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ASB17Q8WXJ9 295 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 COL21A1Q96P44 957 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 PTDSS2Q9BVG9 487 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 POLR2J2Q9GZM3 115 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 ZNF816-ZNF321PA0A0X1KG74 233 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ZNF716A6NP11 495 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 H0YIV9 168 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 GATCO43716 136 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 PROSCO94903 275 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 RAG2P55895 527 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 RAB32Q13637 225 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SMTNL2Q2TAL5 461 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 GJB7Q6PEY0 223 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SSX7Q7RTT5 188 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ENDOVQ8N8Q3 282 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 DYNC2LI1Q8TCX1 351 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ZDHHC16Q969W1 377 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ORAI1Q96D31 301 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 EID2BQ96D98 161 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CNN2Q99439 309 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 P2RX7Q99572 595 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 WRAP53Q9BUR4 548 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 PIF1Q9H611 641 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 BARX1Q9HBU1 254 aaPredicted RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 PRAMEF22A3QJZ6 481 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 PPP5D1E7EU14 171 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 BCAT2O15382 392 aaPredicted RBP5.16□□□□□ -1.58
USF3-202ENST00000478658 SOX15O60248 233 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 ADORA3P0DMS8 318 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 EPXP11678 715 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 EPHA1P21709 976 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 GKP32189 559 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 GRIA4P48058 902 aa5.16□□□□□ -1.58
USF3-202ENST00000478658 ARSDP51689 593 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms