RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 PLK5Q496M5 336 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 FBXO42Q6P3S6 717 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 UBQLNLQ8IYU4 475 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 HMGCLL1Q8TB92 370 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 CCDC74BQ96LY2 380 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 PRRC1Q96M27 445 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 CHCHD6Q9BRQ6 235 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 hCG_2014768A0A024R1R8 64 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 FOXD2O60548 495 aaPredicted RBP11.23□□□□□ -0.61
PCCB-214ENST00000478469 ABCB7O75027 752 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 ATP12AP54707 1039 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 OR2B6P58173 313 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 RAB15P59190 212 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 C19orf18Q8NEA5 215 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 ADAMTS16Q8TE57 1224 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 SMOC1Q9H4F8 434 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 ELL3Q9HB65 397 aaPredicted RBP11.23□□□□□ -0.61
PCCB-214ENST00000478469 FOLH1BQ9HBA9 442 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 HMG20AQ9NP66 347 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 TIGARQ9NQ88 270 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 ABCD2Q9UBJ2 740 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 VDAC3Q9Y277 283 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 GXYLT2A0PJZ3 443 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 ACOT7O00154 380 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 JRKO75564 520 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 TRMT12Q53H54 448 aaKnown RBP11.23□□□□□ -0.61
PCCB-214ENST00000478469 ZNF385BQ569K4 471 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 IL20RBQ6UXL0 311 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 FAM46AQ96IP4 442 aaKnown RBP11.23□□□□□ -0.61
PCCB-214ENST00000478469 SLC7A7Q9UM01 511 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 DSCR3O14972 297 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 AIREO43918 545 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 CTSVO60911 334 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 SYNGR4O95473 234 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 PNMTP11086 282 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 GSTT1P30711 240 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 MICAQ29983 383 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 GAB4Q2WGN9 574 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 MAMDC2Q7Z304 686 aaPredicted RBP11.23□□□□□ -0.61
PCCB-214ENST00000478469 KLHL36Q8N4N3 616 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 OR9Q2Q8NGE9 314 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 OR14L1PQ8NHC6 308 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 TMEM121BQ9BXQ6 578 aaPredicted RBP11.23□□□□□ -0.61
PCCB-214ENST00000478469 TMEM38AQ9H6F2 299 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 CKLFQ9UBR5 152 aa11.23□□□□□ -0.61
PCCB-214ENST00000478469 CNOT11Q9UKZ1 510 aaKnown RBP11.23□□□□□ -0.61
PCCB-214ENST00000478469 ZNF443Q9Y2A4 671 aaPredicted RBP11.23□□□□□ -0.61
PCCB-214ENST00000478469 PIKFYVEQ9Y2I7 2098 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 HCRTR1O43613 425 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 TACSTD2P09758 323 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 ZNF28P17035 718 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 NR4A1P22736 598 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 MVKQ03426 396 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 RUNX2Q13950 521 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 MFSD13AQ14CX5 517 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 TRIM16LQ309B1 348 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 MRPL2Q5T653 305 aaKnown RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 FGD2Q7Z6J4 655 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 OR7G1Q8NGA0 311 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 QRSL1Q9H0R6 528 aaKnown RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 AGPAT4Q9NRZ5 378 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 TAS2R10Q9NYW0 307 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 PCOLCE2Q9UKZ9 415 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 MRPS7Q9Y2R9 242 aaKnown RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 TDRD6O60522 2096 aaKnown RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 GPR179Q6PRD1 2367 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 FNDC1Q4ZHG4 1894 aaPredicted RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 ZNF99A8MXY4 864 aaPredicted RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 SEC14L5O43304 696 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 ASNA1O43681 348 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 NADKO95544 446 aaPredicted RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 CD2P06729 351 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 PUM1Q14671 1186 aaKnown RBP eCLIP11.22□□□□□ -0.61
PCCB-214ENST00000478469 HDDC2Q7Z4H3 204 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 SLITRK4Q8IW52 837 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 CA13Q8N1Q1 262 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 NT5CQ8TCD5 201 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 TSEN15Q8WW01 171 aaKnown RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 TMEM239Q8WW34 195 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 AP3S1Q92572 193 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 UFD1Q92890 307 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 WDR34Q96EX3 536 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 ADAD1Q96M93 576 aaKnown RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 COMMD4Q9H0A8 199 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 B3GAT2Q9NPZ5 323 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 FAM118AQ9NWS6 357 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 C19orf53Q9UNZ5 99 aaPredicted RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 LOXL2Q9Y4K0 774 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 VWA8A3KMH1 1905 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 MAGEB3O15480 346 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 GBX2P52951 348 aaPredicted RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 MLLT10P55197 1068 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 ITGADQ13349 1161 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 KRR1Q13601 381 aaKnown RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 GK3PQ14409 553 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 TRIQKQ629K1 86 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 ULK3Q6PHR2 472 aa11.22□□□□□ -0.61
PCCB-214ENST00000478469 PTRH1Q86Y79 214 aaKnown RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 ACOT11Q8WXI4 607 aaPredicted RBP11.22□□□□□ -0.61
PCCB-214ENST00000478469 HDHD2Q9H0R4 259 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms