RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 HEPACAMQ14CZ8 416 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 UAP1Q16222 522 aaPredicted RBP8.66□□□□□ -1.02
CCM2-210ENST00000478169 DECR1Q16698 335 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 EXOC3L2Q2M3D2 409 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 TSNAXIP1Q2TAA8 658 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 ADAM5Q6NVV9 412 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 FAM9CQ8IZT9 166 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 OR7G2Q8NG99 324 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 ZNF483Q8TF39 744 aaPredicted RBP8.66□□□□□ -1.02
CCM2-210ENST00000478169 EXOSC8Q96B26 276 aaKnown RBP8.66□□□□□ -1.02
CCM2-210ENST00000478169 MRRFQ96E11 262 aaKnown RBP8.66□□□□□ -1.02
CCM2-210ENST00000478169 PLPPR2Q96GM1 343 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 MRPL57Q9BQC6 102 aaKnown RBP8.66□□□□□ -1.02
CCM2-210ENST00000478169 PRRG4Q9BZD6 226 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 SLC35C2Q9NQQ7 365 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 GLRX2Q9NS18 164 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 FAM120CQ9NX05 1096 aaKnown RBP8.66□□□□□ -1.02
CCM2-210ENST00000478169 PAQR5Q9NXK6 330 aaPredicted RBP8.66□□□□□ -1.02
CCM2-210ENST00000478169 SENP1Q9P0U3 644 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 XPR1Q9UBH6 696 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 MRTO4Q9UKD2 239 aaKnown RBP8.66□□□□□ -1.02
CCM2-210ENST00000478169 GPR52Q9Y2T5 361 aa8.66□□□□□ -1.02
CCM2-210ENST00000478169 A0A087WV62 115 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 IGLV3-32A0A0A0MS00 114 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 GNG14A0A1W2PPG7 69 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 MANBAO00462 879 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 PPP6CO00743 305 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 TLX2O43763 284 aaPredicted RBP8.65□□□□□ -1.02
CCM2-210ENST00000478169 PCDH7O60245 1069 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 PLGP00747 810 aaPredicted RBP8.65□□□□□ -1.02
CCM2-210ENST00000478169 PLAUP00749 431 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 IFNA2P01563 188 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 KRT6AP02538 564 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 KRT6BP04259 564 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 CTAGE8P0CG41 777 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 PHBP35232 272 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 IDUAP35475 653 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 GSTM5P46439 218 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 KRT6CP48668 564 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 PSMD4P55036 377 aaKnown RBP8.65□□□□□ -1.02
CCM2-210ENST00000478169 CDH13P55290 713 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 CTBP2P56545 445 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 RPS4XP62701 263 aaKnown RBP8.65□□□□□ -1.02
CCM2-210ENST00000478169 C17orf67Q0P5P2 114 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 ZNF155Q12901 538 aaPredicted RBP8.65□□□□□ -1.02
CCM2-210ENST00000478169 STX5Q13190 355 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCM2-210ENST00000478169 CLEC12BQ2HXU8 276 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 TMEM44Q2T9K0 475 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 SPIN4Q56A73 249 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 HMBOX1Q6NT76 420 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 PODNL1Q6PEZ8 512 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 ZDHHC24Q6UX98 284 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 BEND4Q6ZU67 534 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 RPS27LQ71UM5 84 aaKnown RBP8.65□□□□□ -1.02
CCM2-210ENST00000478169 CTAGE4Q8IX94 777 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 OR5M1Q8NGP8 315 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 DUSP19Q8WTR2 217 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 ANP32BQ92688 251 aaKnown RBP8.65□□□□□ -1.02
CCM2-210ENST00000478169 TRMT61AQ96FX7 289 aaKnown RBP8.65□□□□□ -1.02
CCM2-210ENST00000478169 RTN4RQ9BZR6 473 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 MRPL46Q9H2W6 279 aaKnown RBP8.65□□□□□ -1.02
CCM2-210ENST00000478169 KCNF1Q9H3M0 494 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 ACSS3Q9H6R3 686 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 HHATLQ9HCP6 504 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 ZNF225Q9UK10 706 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 MCTS1Q9ULC4 181 aaKnown RBP8.65□□□□□ -1.02
CCM2-210ENST00000478169 LAMP3Q9UQV4 416 aa8.65□□□□□ -1.02
CCM2-210ENST00000478169 RNF212BA8MTL3 300 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 MYO1GB0I1T2 1018 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 RNF223E7ERA6 249 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 OVOL3O00110 214 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 EIF1AYO14602 144 aaKnown RBP8.64□□□□□ -1.03
CCM2-210ENST00000478169 SS18L1O75177 396 aaPredicted RBP8.64□□□□□ -1.03
CCM2-210ENST00000478169 ULK1O75385 1050 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 OR4F21O95013 312 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 IL33O95760 270 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 TP53P04637 393 aaPredicted RBP8.64□□□□□ -1.03
CCM2-210ENST00000478169 NID1P14543 1247 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 ZNF17P17021 662 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 PSMB1P20618 241 aaKnown RBP8.64□□□□□ -1.03
CCM2-210ENST00000478169 HSD17B3P37058 310 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 EIF1AXP47813 144 aaKnown RBP8.64□□□□□ -1.03
CCM2-210ENST00000478169 RAE1P78406 368 aaKnown RBP8.64□□□□□ -1.03
CCM2-210ENST00000478169 PRR5P85299 388 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 CLCQ05315 142 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 ACSM2AQ08AH3 577 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 C2orf54Q08AI8 447 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 VEZF1Q14119 521 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 RASA2Q15283 850 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 TRADDQ15628 312 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 SH2D4BQ5SQS7 431 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 LCE2DQ5TA82 110 aaPredicted RBP8.64□□□□□ -1.03
CCM2-210ENST00000478169 ACSM2BQ68CK6 577 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 GALNT18Q6P9A2 607 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 MARCH3Q86UD3 253 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 GGNQ86UU5 652 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 STK32CQ86UX6 486 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 EXOC3L1Q86VI1 746 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 WFDC8Q8IUA0 241 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms