RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 ABCD2Q9UBJ2 740 aa18.31■□□□□ 0.52
ACTB-210ENST00000477812 P2RX2Q9UBL9 471 aa18.31■□□□□ 0.52
ACTB-210ENST00000477812 MRTO4Q9UKD2 239 aaKnown RBP18.31■□□□□ 0.52
ACTB-210ENST00000477812 PCDHGB6Q9Y5F9 930 aa18.31■□□□□ 0.52
ACTB-210ENST00000477812 TRAV17A0A0B4J275 112 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 NME2P1O60361 137 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 FCMRO60667 390 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 NGFRP08138 427 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 ARAFP10398 606 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 NME2P22392 152 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 LCN1P31025 176 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 PTGDSP41222 190 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 RFX3P48380 749 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 MNAT1P51948 309 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 PSMD4P55036 377 aaKnown RBP18.3■□□□□ 0.52
ACTB-210ENST00000477812 PSME3P61289 254 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 SYPL1Q16563 259 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 SLC6A19Q695T7 634 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 SERPINA11Q86U17 422 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 FBXW8Q8N3Y1 598 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 SAP130Q9H0E3 1048 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.3■□□□□ 0.522e-23■■■□□ 15.6
ACTB-210ENST00000477812 SLC38A1Q9H2H9 487 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 TIMMDC1Q9NPL8 285 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 POLE3Q9NRF9 147 aa18.3■□□□□ 0.52
ACTB-210ENST00000477812 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.3■□□□□ 0.52
ACTB-210ENST00000477812 DSPPQ9NZW4 1301 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 A0A0G2JMM0 328 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 A0A1W2PPB8 328 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 A0A1W2PRS3 328 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 ANKRD33BA6NCL7 494 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 KIR3DP1A8MWS1 328 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 NME4O00746 187 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 TP53I11O14683 189 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 ATXN7O15265 892 aaPredicted RBP18.29■□□□□ 0.52
ACTB-210ENST00000477812 KIAA0513O60268 411 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 FADS1O60427 444 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 STX11O75558 287 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 UTS2O95399 124 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 H6PDO95479 791 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 SP1P08047 785 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 SLC7A2P52569 658 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 GRAMD1BQ3KR37 738 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 SLC22A10Q63ZE4 541 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 BICRALQ6AI39 1079 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 TYW3Q6IPR3 259 aaKnown RBP18.29■□□□□ 0.52
ACTB-210ENST00000477812 FRRS1Q6ZNA5 592 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 ZZZ3Q8IYH5 903 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 PGAM4Q8N0Y7 254 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 RBM15BQ8NDT2 890 aaKnown RBP18.29■□□□□ 0.52
ACTB-210ENST00000477812 OR4C3Q8NH37 302 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 OR10A6Q8NH74 314 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 DEPPQ9NTK1 212 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 CNIH4Q9P003 139 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 KCNE5Q9UJ90 142 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 B3GNT3Q9Y2A9 372 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 PCDHGA10Q9Y5H3 936 aa18.29■□□□□ 0.52
ACTB-210ENST00000477812 CENPVL1A0A0U1RR11 272 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 BCHEP06276 602 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 CD46P15529 392 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 EVI2BP34910 448 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 CASP3P42574 277 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 SLC25A3Q00325 362 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 BNIP1Q12981 228 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 ZNF169Q14929 603 aaPredicted RBP18.28■□□□□ 0.52
ACTB-210ENST00000477812 NADK2Q4G0N4 442 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 ZNF766Q5HY98 468 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 SLC25A25Q6KCM7 469 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 APOOLQ6UXV4 268 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 LRRC74BQ6ZQY2 392 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 GRHL3Q8TE85 626 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 TMEM19Q96HH6 336 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 C5orf34Q96MH7 638 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 ZNF583Q96ND8 569 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 TREX2Q9BQ50 279 aaPredicted RBP18.28■□□□□ 0.52
ACTB-210ENST00000477812 SPATA9Q9BWV2 254 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 MFRPQ9BY79 579 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 RTN4RQ9BZR6 473 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 TMEM181Q9P2C4 612 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 GMPR2Q9P2T1 348 aaKnown RBP18.28■□□□□ 0.52
ACTB-210ENST00000477812 ABCG2Q9UNQ0 655 aa18.28■□□□□ 0.52
ACTB-210ENST00000477812 PRAMEF25A6NGN4 478 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 B2RBV5 119 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 SLC28A2O43868 658 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 NR2F1P10589 423 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 ATP6V1C1P21283 382 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 TBXA2RP21731 343 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 GAS1P54826 345 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 CHRNEQ04844 493 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 CYP51A1Q16850 503 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 ZNF630Q2M218 657 aaPredicted RBP18.27■□□□□ 0.52
ACTB-210ENST00000477812 PLEKHN1Q494U1 663 aaPredicted RBP18.27■□□□□ 0.52
ACTB-210ENST00000477812 GPAT3Q53EU6 434 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 PRAMEF20Q5VT98 475 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 PRAMEF8Q5VWM4 474 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 PRAMEF7Q5VXH5 474 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 RINLQ6ZS11 566 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 METTL25Q8N6Q8 603 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 Q8NA96 180 aa18.27■□□□□ 0.52
ACTB-210ENST00000477812 POGLUT1Q8NBL1 392 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms