RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 EMC3Q9P0I2 261 aa17.58■□□□□ 0.4
VARS2-209ENST00000477288 HMGCLP35914 325 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 CDKN2CP42773 168 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 HTRA3P83110 453 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 SQSTM1Q13501 440 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 TTC9BQ8N6N2 239 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 ZNF317Q96PQ6 595 aaPredicted RBP17.57■□□□□ 0.4
VARS2-209ENST00000477288 RLIMQ9NVW2 624 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 FAM118AQ9NWS6 357 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 HCFC1R1Q9NWW0 138 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 RHBDD3Q9Y3P4 386 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 LRRTM2O43300 516 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 SERPINA5P05154 406 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 C3orf38Q5JPI3 329 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 ACVR1CQ8NER5 493 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 LGALS12Q96DT0 336 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 ANKRD33BA6NCL7 494 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 ALDOAP04075 364 aaKnown RBP17.57■□□□□ 0.4
VARS2-209ENST00000477288 GDF1P27539 372 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 CLCN2P51788 898 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 RAB31Q13636 194 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 SERTAD2Q14140 314 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 COMMD6Q7Z4G1 85 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 C7orf43Q8WVR3 580 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 FKBP10Q96AY3 582 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 SAMD8Q96LT4 415 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 CASC3O15234 703 aaKnown RBP17.57■□□□□ 0.4
VARS2-209ENST00000477288 LPLP06858 475 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 DRD5P21918 477 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 CDCA3Q99618 268 aaPredicted RBP17.57■□□□□ 0.4
VARS2-209ENST00000477288 DPH1Q9BZG8 443 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 ASF1BQ9NVP2 202 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 SLC7A7Q9UM01 511 aa17.57■□□□□ 0.4
VARS2-209ENST00000477288 TRAPPC13A5PLN9 417 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 ZNF254O75437 659 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 LCKP06239 509 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 MTNR1AP48039 350 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 CX3CR1P49238 355 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 CLDN8P56748 225 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 MAMDC4Q6UXC1 1216 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 LANCL3Q6ZV70 420 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 SCML4Q8N228 414 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 CCM2LQ9NUG4 571 aaPredicted RBP17.56■□□□□ 0.4
VARS2-209ENST00000477288 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.56■□□□□ 0.4
VARS2-209ENST00000477288 FAM230AA0A1W2PPH8 454 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 OR52A4PA6NMU1 304 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 HSBP1L1C9JCN9 74 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 PRKYO43930 277 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 MPIG6BO95866 241 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 SERPINA7P05543 415 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 METTL2BQ6P1Q9 378 aaKnown RBP17.56■□□□□ 0.4
VARS2-209ENST00000477288 MEX3BQ6ZN04 569 aaKnown RBP17.56■□□□□ 0.4
VARS2-209ENST00000477288 CNEP1R1Q8N9A8 125 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 OR9A2Q8NGT5 310 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 DCUN1D4Q92564 292 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 RDH16O75452 317 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 PCGF3Q3KNV8 242 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 TMEM53Q6P2H8 277 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 TOE1Q96GM8 510 aaKnown RBP17.56■□□□□ 0.4
VARS2-209ENST00000477288 PLEKHJ1Q9NW61 149 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 WDR37Q9Y2I8 494 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 BCAS1O75363 584 aaPredicted RBP17.56■□□□□ 0.4
VARS2-209ENST00000477288 WDTC1Q8N5D0 677 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 SYT14Q8NB59 555 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 CXXC1Q9P0U4 656 aaPredicted RBP17.56■□□□□ 0.4
VARS2-209ENST00000477288 MCTS1Q9ULC4 181 aaKnown RBP17.56■□□□□ 0.4
VARS2-209ENST00000477288 A0A0A6YYC8 382 aaPredicted RBP17.56■□□□□ 0.4
VARS2-209ENST00000477288 PIGBOS1A0A0B4J2F0 54 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 A0A0J9YY10 115 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 I3L1I5 382 aaPredicted RBP17.56■□□□□ 0.4
VARS2-209ENST00000477288 TMEM150AQ86TG1 271 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 PDZD9Q8IXQ8 264 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 CMTM1Q8IZ96 169 aa17.56■□□□□ 0.4
VARS2-209ENST00000477288 GTPBP8Q8N3Z3 284 aaPredicted RBP17.56■□□□□ 0.4
VARS2-209ENST00000477288 SAV1Q9H4B6 383 aaPredicted RBP17.56■□□□□ 0.4
VARS2-209ENST00000477288 DCDC2BA2VCK2 349 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 POU3F2P20265 443 aaPredicted RBP17.55■□□□□ 0.4
VARS2-209ENST00000477288 ZNF619Q8N2I2 560 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 WDSUB1Q8N9V3 476 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 CIDECQ96AQ7 238 aaPredicted RBP17.55■□□□□ 0.4
VARS2-209ENST00000477288 MKS1Q9NXB0 559 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 TNFSF4P23510 183 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 STT3AP46977 705 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 CXCL12P48061 93 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 SNRPD2P62316 118 aaKnown RBP17.55■□□□□ 0.4
VARS2-209ENST00000477288 TP53I3Q53FA7 332 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 ZNF529Q6P280 563 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 FAM83FQ8NEG4 500 aaPredicted RBP17.55■□□□□ 0.4
VARS2-209ENST00000477288 CACNG6Q9BXT2 260 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 B3GNT3Q9Y2A9 372 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 FAM189A1O60320 539 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 ACTBP60709 375 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 ACTG1P63261 375 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 C6orf132Q5T0Z8 1188 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 MRPL41Q8IXM3 137 aaKnown RBP17.55■□□□□ 0.4
VARS2-209ENST00000477288 APIPQ96GX9 242 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 MS4A4EQ96PG1 132 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 OR14A2Q96R54 314 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 ARMC1Q9NVT9 282 aa17.55■□□□□ 0.4
VARS2-209ENST00000477288 LAMP1P11279 417 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms