RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 KCNK2O95069 426 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 UTS2O95399 124 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 CPSF4O95639 269 aaKnown RBP13.19□□□□□ -0.3
ABCF3-211ENST00000475728 AGR2O95994 175 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 AK1P00568 194 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 NGFRP08138 427 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 HOXD4P09016 255 aaPredicted RBP13.19□□□□□ -0.3
ABCF3-211ENST00000475728 CELA3AP09093 270 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 HPGDP15428 266 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 ATP6V1C1P21283 382 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 UQCRC2P22695 453 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 PTPN6P29350 595 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 PTGDSP41222 190 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 IDH3AP50213 366 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 ANXA11P50995 505 aaKnown RBP13.19□□□□□ -0.3
ABCF3-211ENST00000475728 SMSP52788 366 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 AQP5P55064 265 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 TXNL4AP83876 142 aaKnown RBP13.19□□□□□ -0.3
ABCF3-211ENST00000475728 EXOSC6Q5RKV6 272 aaKnown RBP13.19□□□□□ -0.3
ABCF3-211ENST00000475728 WLSQ5T9L3 541 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 FNDC7Q5VTL7 733 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 DESI1Q6ICB0 168 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 RPTNQ6XPR3 784 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 MSANTD1Q6ZTZ1 278 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 FGD2Q7Z6J4 655 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 CD163Q86VB7 1156 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 DOLPP1Q86YN1 238 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 NEIL3Q8TAT5 605 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 FBXO30Q8TB52 745 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 FAM110BQ8TC76 370 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 PIK3R3Q92569 461 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 C16orf58Q96GQ5 468 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 OR52E6Q96RD3 313 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 VKORC1Q9BQB6 163 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 YIPF4Q9BSR8 244 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 RMND5AQ9H871 391 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 GPATCH2Q9NW75 528 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 PPP4R1LQ9P1A2 415 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 SH3BGRL2Q9UJC5 107 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 TINAGQ9UJW2 476 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 ACAD8Q9UKU7 415 aa13.19□□□□□ -0.3
ABCF3-211ENST00000475728 USP9YO00507 2555 aaPredicted RBP13.18□□□□□ -0.3
ABCF3-211ENST00000475728 FIGNL2A6NMB9 653 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 NPIPA2E9PIF3 369 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 NPIPA3F8WFD2 350 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 SCO2O43819 266 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 CHI3L1P36222 383 aaPredicted RBP13.18□□□□□ -0.3
ABCF3-211ENST00000475728 MRPL19P49406 292 aaKnown RBP13.18□□□□□ -0.3
ABCF3-211ENST00000475728 PHC1P78364 1004 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 SF3B4Q15427 424 aaKnown RBP eCLIP13.18□□□□□ -0.3
ABCF3-211ENST00000475728 TMEM211Q6ICI0 200 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 C6orf120Q7Z4R8 191 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 ANKRD46Q86W74 232 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 ZNF527Q8NB42 609 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 OR4K17Q8NGC6 315 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 OR5AK3PQ8NH89 298 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 GOT1L1Q8NHS2 421 aaPredicted RBP13.18□□□□□ -0.3
ABCF3-211ENST00000475728 PHF10Q8WUB8 498 aaKnown RBP13.18□□□□□ -0.3
ABCF3-211ENST00000475728 SLC35G5Q96KT7 338 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 TEX37Q96LM6 180 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 PANX1Q96RD7 426 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 HOXD1Q9GZZ0 328 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 SERHLQ9NQF3 203 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 UBQLN4Q9NRR5 601 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 EXD2Q9NVH0 621 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 TMEM45AQ9NWC5 275 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 MEMO1Q9Y316 297 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 MRPS18CQ9Y3D5 142 aaKnown RBP13.18□□□□□ -0.3
ABCF3-211ENST00000475728 LIPGQ9Y5X9 500 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 SPTAN1Q13813 2472 aaKnown RBP13.18□□□□□ -0.3
ABCF3-211ENST00000475728 RELNP78509 3460 aa13.18□□□□□ -0.3
ABCF3-211ENST00000475728 C15orf38-AP3S2A0A0A6YYH1 394 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 FAM234BA2RU67 622 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 EDF1O60869 148 aaKnown RBP13.17□□□□□ -0.3
ABCF3-211ENST00000475728 WDR1O75083 606 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 GABRA1P14867 456 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 TBXA2RP21731 343 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 MATN1P21941 496 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 IL12AP29459 219 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 SRD5A2P31213 254 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 PTGER4P35408 488 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 MAGEA8P43361 318 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 POLR2JP52435 117 aaKnown RBP13.17□□□□□ -0.3
ABCF3-211ENST00000475728 DGKQP52824 942 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 GAS1P54826 345 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 C17orf67Q0P5P2 114 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 GANABQ14697 944 aaKnown RBP13.17□□□□□ -0.3
ABCF3-211ENST00000475728 GRAMD1BQ3KR37 738 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 ATAD3BQ5T9A4 648 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 HIST2H2BCQ6DN03 193 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 MISPQ8IVT2 679 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 PM20D2Q8IYS1 436 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 WDSUB1Q8N9V3 476 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 MIPOL1Q8TD10 442 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 CDS1Q92903 461 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 NEURL3Q96EH8 262 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 MARK4Q96L34 752 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 OR2B2Q9GZK3 357 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 SLC6A15Q9H2J7 730 aa13.17□□□□□ -0.3
ABCF3-211ENST00000475728 PTGES2Q9H7Z7 377 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms