RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 KHKP50053 298 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 BACE1P56817 501 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 GAMTQ14353 236 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 DRAP1Q14919 205 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 AASDHQ4L235 1098 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 PIGGQ5H8A4 983 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 FBXO42Q6P3S6 717 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 WDR59Q6PJI9 974 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 DPY19L2P2Q6ZN68 376 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SMIM15Q7Z3B0 74 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 GPD1LQ8N335 351 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 C2orf73Q8N5S3 287 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 BVESQ8NE79 360 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CSGALNACT1Q8TDX6 532 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 C2CD4CQ8TF44 421 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 BTN2A2Q8WVV5 523 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 NEIL1Q96FI4 390 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CELF6Q96J87 481 aaKnown RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SUSD3Q96L08 255 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ZNF583Q96ND8 569 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 NICN1Q9BSH3 213 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 TMEM121Q9BTD3 319 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 NDUFAF3Q9BU61 184 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 DDA1Q9BW61 102 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SGPP1Q9BX95 441 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 TRIM31Q9BZY9 425 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SMOC2Q9H3U7 446 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 OBP2BQ9NPH6 170 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 AGPAT4Q9NRZ5 378 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SEC14L3Q9UDX4 400 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 KIF25Q9UIL4 384 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ST3GAL5Q9UNP4 418 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ORC6Q9Y5N6 252 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 OR6C76A6NM76 312 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SUPT3HB4E1H0 165 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 DUSP11O75319 330 aaKnown RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 OR2J2O76002 312 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 RECQL5O94762 991 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 HIST1H2AGP0C0S8 130 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 HIST1H2ADP20671 130 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CYP2F1P24903 491 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 PAX6P26367 422 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SORDQ00796 357 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 RAB35Q15286 201 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 RNASE10Q5GAN6 216 aaKnown RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 FAM129CQ86XR2 697 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 DNAJC22Q8N4W6 341 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 OR10T2Q8NGX3 314 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 LMO3Q8TAP4 145 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 NUDCD2Q8WVJ2 157 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SPSB1Q96BD6 273 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 C3orf49Q96BT1 292 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 HIST1H2AHQ96KK5 128 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 MRGPRX3Q96LB0 322 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 HIST1H2AJQ99878 128 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 LXNQ9BS40 222 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 H2AFJQ9BTM1 129 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 WDR18Q9BV38 432 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 BHLHE41Q9C0J9 482 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SLIRPQ9GZT3 109 aaKnown RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SLC38A1Q9H2H9 487 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CXorf21Q9HAI6 301 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 GCM1Q9NP62 436 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ARHGAP20Q9P2F6 1191 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 MRM2Q9UI43 246 aaKnown RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SSR3Q9UNL2 185 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 RLFQ13129 1914 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 A0A1W2PQ09 198 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CLEC18AA5D8T8 446 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 TMEM150BA6NC51 233 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 COLCA2A8K830 154 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 E7ENX8 843 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CFLARO15519 480 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 TEX33O43247 280 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SPAG7O75391 227 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 FAM157BP0CG42 384 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 PLS3P13797 630 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CD22P20273 847 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ITPKBP27987 946 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CHRNA4P43681 627 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ARF3P61204 181 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ARF1P84077 181 aaKnown RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 C18orf21Q32NC0 220 aaPredicted RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 ATP13A5Q4VNC0 1218 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 PRAMEF18Q5VWM3 479 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 KIRREL2Q6UWL6 708 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CLEC18BQ6UXF7 455 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 SHFQ7M4L6 423 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 LUZP2Q86TE4 346 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CATSPER3Q86XQ3 398 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 DCUN1D3Q8IWE4 304 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 GJD3Q8N144 294 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CCDC71LQ8N9Z2 235 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CLEC18CQ8NCF0 446 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 CYP2W1Q8TAV3 490 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 MUL1Q969V5 352 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 TMEM45BQ96B21 275 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 RRNAD1Q96FB5 475 aaKnown RBP4.56□□□□□ -1.68
NPHP3-206ENST00000474871 TMEM176AQ96HP8 235 aa4.56□□□□□ -1.68
NPHP3-206ENST00000474871 RSPO3Q9BXY4 272 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms