RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 DPEP1P16444 411 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 MGMTP16455 207 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CSF2RBP32927 897 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CBSP35520 551 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CD86P42081 329 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 SLC6A11P48066 632 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 POU3F4P49335 361 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ZNF84P51523 738 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 NR0B1P51843 470 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 RAP2BP61225 183 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 RPS14P62263 151 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 MAPKAPK3Q16644 382 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CDO1Q16878 200 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ASPHD2Q6ICH7 369 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 FAM71E1Q6IPT2 247 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 KIAA1161Q6NSJ0 714 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ZNF322Q6U7Q0 402 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 TMUB2Q71RG4 321 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 RAB11FIP2Q7L804 512 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 LINGO2Q7L985 606 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 LRRC70Q7Z2Q7 622 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 LUZP2Q86TE4 346 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 TLK2Q86UE8 772 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 EXD3Q8N9H8 876 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 RNF149Q8NC42 400 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 RNASEH2CQ8TDP1 164 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 LCN9Q8WX39 176 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ZNF707Q96C28 371 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 MENTQ9BUN1 341 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CNPPD1Q9BV87 410 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 MRPS30Q9NP92 439 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 RCC2Q9P258 522 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 MYEF2Q9P2K5 600 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 RPS6KB2Q9UBS0 482 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 FOXD3Q9UJU5 478 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 FBXL2Q9UKC9 423 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 FBXW2Q9UKT8 454 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 EXOSC1Q9Y3B2 195 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 FLVCR1Q9Y5Y0 555 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 A0A1W2PRG6 482 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 WIPF3A6NGB9 483 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ACSL4O60488 711 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 TSPAN2O60636 221 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CDRT1O95170 752 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ETHE1O95571 254 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 RLN2P04090 185 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 SYPP08247 313 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CD14P08571 375 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 SPP1P10451 314 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 RHOQP17081 205 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 MAGP20916 626 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 PRPS1L1P21108 318 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 PTAFRP25105 342 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 MAP3K8P41279 467 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 PPM1FP49593 454 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 CDKN1CP49918 316 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 CCR9P51686 369 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 LBX1P52954 281 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 LILRA4P59901 499 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 RPL6Q02878 288 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 ZNF267Q14586 743 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 NTRK2Q16620 822 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 LBHQ53QV2 105 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 BICRALQ6AI39 1079 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 PYHIN1Q6K0P9 492 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ACSM5Q6NUN0 579 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 MZT2BQ6NZ67 158 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 BTNL8Q6UX41 500 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ZNF852Q6ZMS4 543 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 GKN2Q86XP6 184 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 OR6V1Q8N148 313 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 OR4L1Q8NH43 312 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 OR14A16Q8NHC5 309 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ZDHHC1Q8WTX9 485 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 AP3S1Q92572 193 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 OMA1Q96E52 524 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 APIPQ96GX9 242 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ZDHHC5Q9C0B5 715 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CHST5Q9GZS9 411 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 TKTL2Q9H0I9 626 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 RPF1Q9H9Y2 349 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 LHX9Q9NQ69 397 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 SPHK2Q9NRA0 654 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 POLE3Q9NRF9 147 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CACFD1Q9UGQ2 172 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 TEKT2Q9UIF3 430 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ZNF330Q9Y3S2 320 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 RPL36Q9Y3U8 105 aaKnown RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 ARL5AQ9Y689 179 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 PCSK5Q92824 1860 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 NAP1L6A6NFF2 107 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 J3KTA2 159 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 SULT2B1O00204 365 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 FOXE1O00358 373 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 FAAHO00519 579 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 BHLHE40O14503 412 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 PRODHO43272 600 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 CTNSO60931 367 aa3.82□□□□□ -1.8
USP16-205ENST00000474835 ZIC2O95409 532 aaPredicted RBP3.82□□□□□ -1.8
USP16-205ENST00000474835 SLC34A2O95436 690 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms