RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, human

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE1-222	ENST00000473373	NATD1	Q8N6N6	113 aa		10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	SMPDL3B	Q92485	455 aa		10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	OTUB1	Q96FW1	271 aa	Predicted RBP	10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	ZNF764	Q96H86	408 aa	Predicted RBP	10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	TIMP4	Q99727	224 aa		10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	LMF2	Q9BU23	707 aa	Known RBP	10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	DUSP26	Q9BV47	211 aa		10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	UGT2B28	Q9BY64	529 aa		10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	NUF2	Q9BZD4	464 aa		10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	DPY30	Q9C005	99 aa		10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	DSN1	Q9H410	356 aa		10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	ATP6V1H	Q9UI12	483 aa		10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	ABCG2	Q9UNQ0	655 aa		10.5	□□□□□ -0.73
CPNE1-222	ENST00000473373	APC	P25054	2843 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373		A0A0G2JNJ9	132 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	GXYLT2	A0PJZ3	443 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	C19orf84	I3L1E1	186 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	SCD	O00767	359 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	DVL2	O14641	736 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	TBX19	O60806	448 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	IL33	O95760	270 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	C6orf47	O95873	294 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	KRT16	P08779	473 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	LAMP1	P11279	417 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	G6PD	P11413	515 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	HK1	P19367	917 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	BMP5	P22003	454 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	ARRB2	P32121	409 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	PTGDS	P41222	190 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	CCT3	P49368	545 aa	Known RBP	10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	DGKQ	P52824	942 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	DSCR4	P56555	118 aa	Predicted RBP	10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	MAGOH	P61326	146 aa	Known RBP	10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	POU6F2	P78424	691 aa	Predicted RBP	10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	MYBPH	Q13203	477 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	PDE7A	Q13946	482 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	LASP1	Q14847	261 aa	Known RBP	10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	CDSN	Q15517	529 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	FNDC7	Q5VTL7	733 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	NXN	Q6DKJ4	435 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	VASN	Q6EMK4	673 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	BHLHB9	Q6PI77	547 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	MARCH3	Q86UD3	253 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	LACC1	Q8IV20	430 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	UBQLNL	Q8IYU4	475 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	KRTCAP2	Q8N6L1	136 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	ZNF614	Q8N883	585 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	WDSUB1	Q8N9V3	476 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	GATS	Q8NAP1	163 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	VPS37A	Q8NEZ2	397 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	OR56A1	Q8NGH5	318 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	LILRB4	Q8NHJ6	448 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	ADAMTS15	Q8TE58	950 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	OR5P2	Q8WZ92	322 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	UBQLN3	Q9H347	655 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	NEUROD4	Q9HD90	331 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	FAM120C	Q9NX05	1096 aa	Known RBP	10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	MED11	Q9P086	117 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373		Q9UFV3	132 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	FBXL2	Q9UKC9	423 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	PCDHGB3	Q9Y5G1	929 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373	FAM215A	Q9Y5M1	114 aa		10.49	□□□□□ -0.73
CPNE1-222	ENST00000473373		H3BML4	177 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	NDUFB5	O43674	189 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	CPSF4	O95639	269 aa	Known RBP	10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	NUDT14	O95848	222 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	IFI6	P09912	130 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	ACP2	P11117	423 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	LBP	P18428	481 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	UQCRC1	P31930	480 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	WNT3	P56703	355 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	EMX2	Q04743	252 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	C17orf67	Q0P5P2	114 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	BST1	Q10588	318 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	SLC25A35	Q3KQZ1	300 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	GRAMD1B	Q3KR37	738 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	ACSF3	Q4G176	576 aa	Predicted RBP	10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	RIPPLY2	Q5TAB7	128 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	RTL6	Q6ICC9	239 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	ZCCHC12	Q6PEW1	402 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	GRAMD2A	Q8IUY3	354 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	MEIOB	Q8N635	442 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	OR4A15	Q8NGL6	344 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	OR6Y1	Q8NGX8	325 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	OR5AK3P	Q8NH89	298 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	DUSP19	Q8WTR2	217 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	MOAP1	Q96BY2	351 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	FAM120B	Q96EK7	910 aa	Known RBP	10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	G6PC3	Q9BUM1	346 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	OR2B2	Q9GZK3	357 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	AKTIP	Q9H8T0	292 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	HHATL	Q9HCP6	504 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	FLRT3	Q9NZU0	649 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	STOML1	Q9UBI4	398 aa		10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	MARCO	Q9UEW3	520 aa	Predicted RBP	10.48	□□□□□ -0.73
CPNE1-222	ENST00000473373	ITGB1BP2	Q9UKP3	347 aa		10.48	□□□□□ -0.73

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