RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 KCNJ5P48544 419 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 ALDH9A1P49189 494 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 HTR6P50406 440 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 CDH13P55290 713 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 DSCR4P56555 118 aaPredicted RBP8.6□□□□□ -1.03
MCF2L-223ENST00000473345 VEZF1Q14119 521 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 PGGHGQ32M88 737 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 KRTAP24-1Q3LI83 254 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 BEX5Q5H9J7 111 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 RAET1LQ5VY80 246 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 FAM214BQ7L5A3 538 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 MARCH3Q86UD3 253 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 HIPK1Q86Z02 1210 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 SLC44A2Q8IWA5 706 aaPredicted RBP8.6□□□□□ -1.03
MCF2L-223ENST00000473345 GSPT2Q8IYD1 628 aaKnown RBP8.6□□□□□ -1.03
MCF2L-223ENST00000473345 TMEM171Q8WVE6 324 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 ZNF524Q96C55 264 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 REPS1Q96D71 796 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 TMCO6Q96DC7 493 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 C1GALT1C1Q96EU7 318 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 FMO2Q99518 471 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 NTMT1Q9BV86 223 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 PLSCR4Q9NRQ2 329 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 UTS2RQ9UKP6 389 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 PROCRQ9UNN8 238 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 SLC12A4Q9UP95 1085 aa8.6□□□□□ -1.03
MCF2L-223ENST00000473345 MAGED1Q9Y5V3 778 aaPredicted RBP8.6□□□□□ -1.03
MCF2L-223ENST00000473345 CCDC189A1A4V9 331 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 EIF3HO15372 352 aaKnown RBP eCLIP8.59□□□□□ -1.03
MCF2L-223ENST00000473345 PHF1O43189 567 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-223ENST00000473345 CD5LO43866 347 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 GCM2O75603 506 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-223ENST00000473345 IL3P08700 152 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 RPS17P08708 135 aaKnown RBP8.59□□□□□ -1.03
MCF2L-223ENST00000473345 PSMA4P25789 261 aaKnown RBP8.59□□□□□ -1.03
MCF2L-223ENST00000473345 GCKP35557 465 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 CCNG1P51959 295 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 PNLIPRP2P54317 469 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 EEF1A1P68104 462 aaKnown RBP8.59□□□□□ -1.03
MCF2L-223ENST00000473345 ACAP2Q15057 778 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 EEF1A1P5Q5VTE0 462 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 OR2A2Q6IF42 318 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 ZAR1Q86SH2 424 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 OR4K17Q8NGC6 315 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 TRPC4APQ8TEL6 797 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 DUSP19Q8WTR2 217 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 CDKL2Q92772 493 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 EXOSC8Q96B26 276 aaKnown RBP8.59□□□□□ -1.03
MCF2L-223ENST00000473345 C11orf24Q96F05 449 aaPredicted RBP8.59□□□□□ -1.03
MCF2L-223ENST00000473345 SLC39A3Q9BRY0 314 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 ACTR6Q9GZN1 396 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 SLCO5A1Q9H2Y9 848 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 YAE1D1Q9NRH1 226 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 PPP4R1LQ9P1A2 415 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 TXNDC16Q9P2K2 825 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 PRODH2Q9UF12 536 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 CFL2Q9Y281 166 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 ZNF175Q9Y473 711 aa8.59□□□□□ -1.03
MCF2L-223ENST00000473345 IGHV4-30-2A0A087WSY4 118 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 GXYLT2A0PJZ3 443 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 GOLGA6L10A6NI86 522 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 SYCE1LA8MT33 242 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 EFNA2O43921 213 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 SS18L1O75177 396 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-223ENST00000473345 OR4F21O95013 312 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 PSMG1O95456 288 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 MAGEA4P43358 317 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 MAGEA12P43365 314 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 PHEXP78562 749 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 UAP1Q16222 522 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-223ENST00000473345 GGTA1PQ4G0N0 100 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 LGSNQ5TDP6 509 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 C6orf163Q5TEZ5 329 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 ALKBH2Q6NS38 261 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 NUFIP2Q7Z417 695 aaKnown RBP8.58□□□□□ -1.04
MCF2L-223ENST00000473345 CCDC91Q7Z6B0 441 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 GALNT10Q86SR1 603 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 ZNF619Q8N2I2 560 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 KBTBD8Q8NFY9 601 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 OR10D3Q8NH80 312 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 UHMK1Q8TAS1 419 aaKnown RBP8.58□□□□□ -1.04
MCF2L-223ENST00000473345 POC1BQ8TC44 478 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 ZNF483Q8TF39 744 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-223ENST00000473345 HTRA1Q92743 480 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 S100PBPQ96BU1 408 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 APIPQ96GX9 242 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 ACPTQ9BZG2 426 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 VIPAS39Q9H9C1 493 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 XPR1Q9UBH6 696 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 LIPT1Q9Y234 373 aa8.58□□□□□ -1.04
MCF2L-223ENST00000473345 IGLV3-32A0A0A0MS00 114 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 A0A0J9YW62 118 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 DPRXA6NFQ7 191 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 CXCL13O43927 109 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 PLOD3O60568 738 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 RAMP1O60894 148 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 SASH3O75995 380 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 IL12BP29460 328 aa8.57□□□□□ -1.04
MCF2L-223ENST00000473345 ARL1P40616 181 aaPredicted RBP8.57□□□□□ -1.04
MCF2L-223ENST00000473345 RPS4XP62701 263 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms