RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 PRR22Q8IZ63 422 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 CYP4Z2PQ8N1L4 340 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 ZNF808Q8N4W9 903 aaPredicted RBP8.39□□□□□ -1.07
SMC4-213ENST00000472282 TMEM156Q8N614 296 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 VPS37AQ8NEZ2 397 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 NUP43Q8NFH3 380 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 OR4A15Q8NGL6 344 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 OR5AK3PQ8NH89 298 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 FBXO30Q8TB52 745 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 SLC22A8Q8TCC7 542 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 ADIPOR1Q96A54 375 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 FAM120BQ96EK7 910 aaKnown RBP8.39□□□□□ -1.07
SMC4-213ENST00000472282 VSTM2LQ96N03 204 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 OR52E6Q96RD3 313 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 NSRP1Q9H0G5 558 aaKnown RBP8.39□□□□□ -1.07
SMC4-213ENST00000472282 RABEP2Q9H5N1 569 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 ZNF385DQ9H6B1 395 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 C3orf14Q9HBI5 128 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 ZCCHC3Q9NUD5 404 aaKnown RBP8.39□□□□□ -1.07
SMC4-213ENST00000472282 TAS2R9Q9NYW1 312 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 CCDC167Q9P0B6 97 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 TRIM33Q9UPN9 1127 aa8.39□□□□□ -1.07
SMC4-213ENST00000472282 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 PRSS51A0A1B0GVH4 220 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 GMNCA6NCL1 334 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 FRG2CA6NGY1 282 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 A8MVJ9 347 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 F8W735 103 aaPredicted RBP8.38□□□□□ -1.07
SMC4-213ENST00000472282 J3QW42 95 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 HNRNPRO43390 633 aaKnown RBP8.38□□□□□ -1.07
SMC4-213ENST00000472282 PEX1O43933 1283 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 HS6ST1O60243 411 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 CD1EP15812 388 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 ZNF24P17028 368 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 DRD4P21917 467 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 CCT3P49368 545 aaKnown RBP8.38□□□□□ -1.07
SMC4-213ENST00000472282 CORO7P57737 925 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 DCAF7P61962 342 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 IRX1P78414 480 aaPredicted RBP8.38□□□□□ -1.07
SMC4-213ENST00000472282 PRR5P85299 388 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 RBPJQ06330 500 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 ART3Q13508 389 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 TP53BP2Q13625 1128 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 RCAN2Q14206 197 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 SPDYE7PQ495Y7 208 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 AGKQ53H12 422 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 KRTCAP3Q53RY4 240 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 CMPK2Q5EBM0 449 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 PIGGQ5H8A4 983 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 OPN5Q6U736 354 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 IL20RBQ6UXL0 311 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 DNAJC14Q6Y2X3 702 aaPredicted RBP8.38□□□□□ -1.07
SMC4-213ENST00000472282 TMEM64Q6YI46 380 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 BNC2Q6ZN30 1099 aaPredicted RBP8.38□□□□□ -1.07
SMC4-213ENST00000472282 GK5Q6ZS86 529 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 SPATA21Q7Z572 469 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 CPLX4Q7Z7G2 160 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 DOLPP1Q86YN1 238 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 TAGAPQ8N103 731 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 SLC34A3Q8N130 599 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 HORMAD2Q8N7B1 307 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 FAM98AQ8NCA5 519 aaKnown RBP8.38□□□□□ -1.07
SMC4-213ENST00000472282 C17orf47Q8NEP4 570 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 OR52N2Q8NGI0 321 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 PSMA8Q8TAA3 256 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 SFXN5Q8TD22 340 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 VPS33AQ96AX1 596 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 GIMAP5Q96F15 307 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 LCORQ96JN0 433 aaPredicted RBP8.38□□□□□ -1.07
SMC4-213ENST00000472282 CCDC115Q96NT0 180 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 MS4A4EQ96PG1 132 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 BTBD9Q96Q07 612 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 ELAC2Q9BQ52 826 aaKnown RBP8.38□□□□□ -1.07
SMC4-213ENST00000472282 INPP5KQ9BT40 448 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 HPF1Q9NWY4 346 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 NTMQ9P121 344 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 SUCOQ9UBS9 1254 aaKnown RBP8.38□□□□□ -1.07
SMC4-213ENST00000472282 BTNL2Q9UIR0 455 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 PCDHGB4Q9UN71 923 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 ERVK-11Q9UQG0 969 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 GPR55Q9Y2T6 319 aaPredicted RBP8.38□□□□□ -1.07
SMC4-213ENST00000472282 MEMO1Q9Y316 297 aa8.38□□□□□ -1.07
SMC4-213ENST00000472282 RNF103-CHMP3A0A140T963 221 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 A0A1B0GTH9 108 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 G3V3Y1 287 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 ACOX3O15254 700 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 IL6P05231 212 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 CT45A8P0DMV1 189 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 CT45A9P0DMV2 189 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 ACP2P11117 423 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 ESRRAP11474 423 aaPredicted RBP8.37□□□□□ -1.07
SMC4-213ENST00000472282 ABOP16442 354 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 CAPN3P20807 821 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 DRD5P21918 477 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 HTR1EP28566 365 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 CDKN2CP42773 168 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 PPICP45877 212 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 NRG3P56975 720 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 PSG6Q00889 435 aa8.37□□□□□ -1.07
SMC4-213ENST00000472282 PLCXD2Q0VAA5 305 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms