RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SPRY1O43609 319 aaPredicted RBP16.92■□□□□ 0.3
SORT1-203ENST00000471996 CLDN9O95484 217 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 PGRP06401 933 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 PYGBP11216 843 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 IL32P24001 234 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 IGFBP5P24593 272 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 CDC25BP30305 580 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 AGTR1P30556 359 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 GTF2H2Q13888 395 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 TSC22D1Q15714 1073 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 PFKFB4Q16877 469 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 SFRP5Q5T4F7 317 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 MFSD12Q6NUT3 480 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 GTF2H2CQ6P1K8 395 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 SEZ6L2Q6UXD5 910 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 RAPH1Q70E73 1250 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 GOLGA7Q7Z5G4 137 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 SLC44A2Q8IWA5 706 aaPredicted RBP16.92■□□□□ 0.3
SORT1-203ENST00000471996 GABRG1Q8N1C3 465 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 ZNF619Q8N2I2 560 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 DUSP19Q8WTR2 217 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 CDKL2Q92772 493 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 ADGRG7Q96K78 797 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 RTN4RQ9BZR6 473 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 ABCG2Q9UNQ0 655 aa16.92■□□□□ 0.3
SORT1-203ENST00000471996 SYCE1LA8MT33 242 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 SHISA8B8ZZ34 492 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 RAMP1O60894 148 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 TUBBP07437 444 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 LTA4HP09960 611 aaKnown RBP16.91■□□□□ 0.3
SORT1-203ENST00000471996 GP5P40197 560 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 IRX1P78414 480 aaPredicted RBP16.91■□□□□ 0.3
SORT1-203ENST00000471996 LGSNQ5TDP6 509 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 AGAP6Q5VW22 663 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 FRG2Q64ET8 278 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 COMMD6Q7Z4G1 85 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 GALNT10Q86SR1 603 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 TBC1D1Q86TI0 1168 aaPredicted RBP16.91■□□□□ 0.3
SORT1-203ENST00000471996 CCDC116Q8IYX3 515 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 CDK15Q96Q40 435 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 FRG2BQ96QU4 278 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 FLRT3Q9NZU0 649 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 OR10H1Q9Y4A9 318 aa16.91■□□□□ 0.3
SORT1-203ENST00000471996 SHISA9B4DS77 424 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 TP73O15350 636 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 SYNGR4O95473 234 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 CTAGE8P0CG41 777 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 GFAPP14136 432 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 PTNP21246 168 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 ALDH18A1P54886 795 aaKnown RBP16.9■□□□□ 0.3
SORT1-203ENST00000471996 C21orf58P58505 322 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 ERCC6LQ2NKX8 1250 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 FAM120AOSQ5T036 256 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 IL17RELQ6ZVW7 336 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 CMC1Q7Z7K0 106 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 WDR75Q8IWA0 830 aaKnown RBP16.9■□□□□ 0.3
SORT1-203ENST00000471996 CTAGE4Q8IX94 777 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 ZBED8Q8IZ13 594 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 RHEBL1Q8TAI7 183 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 KAT2AQ92830 837 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 NXNL1Q96CM4 212 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 HBEGFQ99075 208 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 USB1Q9BQ65 265 aaKnown RBP16.9■□□□□ 0.3
SORT1-203ENST00000471996 CACNG6Q9BXT2 260 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 MANSC1Q9H8J5 431 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 UTS2RQ9UKP6 389 aa16.9■□□□□ 0.3
SORT1-203ENST00000471996 ADAMDEC1O15204 470 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 CXCL13O43927 109 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 SEC31AO94979 1220 aaKnown RBP16.89■□□□□ 0.29
SORT1-203ENST00000471996 ALDH9A1P49189 494 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 CDH11P55287 796 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 UBAP2Q5T6F2 1119 aaKnown RBP16.89■□□□□ 0.29
SORT1-203ENST00000471996 GTF2IRD2BQ6EKJ0 949 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 TFAP2EQ6VUC0 442 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 GTF2IRD2Q86UP8 949 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 ZNF525Q8N782 197 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 OR9A2Q8NGT5 310 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 PROX1Q92786 737 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 OSBPL9Q96SU4 736 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 FAIM2Q9BWQ8 316 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 POTEKPQ9BYX7 375 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 NOL11Q9H8H0 719 aaKnown RBP16.89■□□□□ 0.29
SORT1-203ENST00000471996 PFDN4Q9NQP4 134 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 FAM120CQ9NX05 1096 aaKnown RBP16.89■□□□□ 0.29
SORT1-203ENST00000471996 KCNS2Q9ULS6 477 aa16.89■□□□□ 0.29
SORT1-203ENST00000471996 TNPO3Q9Y5L0 923 aaKnown RBP16.89■□□□□ 0.29
SORT1-203ENST00000471996 IGLV3-32A0A0A0MS00 114 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 OR7A17O14581 309 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 ZNF17P17021 662 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 CRABP2P29373 138 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 SSTR1P30872 391 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 SPRP35270 261 aaPredicted RBP16.88■□□□□ 0.29
SORT1-203ENST00000471996 GZMKP49863 264 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 PSG6Q00889 435 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 IRF9Q00978 393 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 GALNT1Q10472 559 aaPredicted RBP16.88■□□□□ 0.29
SORT1-203ENST00000471996 SQLEQ14534 574 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 TTC19Q6DKK2 380 aaPredicted RBP16.88■□□□□ 0.29
SORT1-203ENST00000471996 C11orf71Q6IPW1 123 aa16.88■□□□□ 0.29
SORT1-203ENST00000471996 MARCH3Q86UD3 253 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms