RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 H1F0P07305 194 aaKnown RBP8.69□□□□□ -1.02
VPS52-216ENST00000471309 LYNP07948 512 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 UBTFL6P0CB48 400 aaPredicted RBP8.69□□□□□ -1.02
VPS52-216ENST00000471309 CCL4P13236 92 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 ANXA8P13928 327 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 IL7RP16871 459 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 ZNF28P17035 718 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 PRKACGP22612 351 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 ELAVL4P26378 380 aaKnown RBP8.69□□□□□ -1.02
VPS52-216ENST00000471309 PPICP45877 212 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 DAPP51397 102 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 PSMD4P55036 377 aaKnown RBP8.69□□□□□ -1.02
VPS52-216ENST00000471309 RGS8P57771 180 aaPredicted RBP8.69□□□□□ -1.02
VPS52-216ENST00000471309 RAB15P59190 212 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 DCAF7P61962 342 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 PSPHP78330 225 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 INSM1Q01101 510 aaPredicted RBP8.69□□□□□ -1.02
VPS52-216ENST00000471309 TCF15Q12870 199 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 IL18R1Q13478 541 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 DGCR6Q14129 220 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 GANABQ14697 944 aaKnown RBP8.69□□□□□ -1.02
VPS52-216ENST00000471309 EBPQ15125 230 aaKnown RBP8.69□□□□□ -1.02
VPS52-216ENST00000471309 ZNF141Q15928 474 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 MAPK14Q16539 360 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 ZSWIM7Q19AV6 140 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 FLYWCH1Q4VC44 716 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 TTC23Q5W5X9 447 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 ANKRD34AQ69YU3 496 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 LANCL3Q6ZV70 420 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 ANKRD37Q7Z713 158 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 PRSS58Q8IYP2 241 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 TAGAPQ8N103 731 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 ZNF321PQ8N8H1 164 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 ATG16L2Q8NAA4 619 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 ZSCAN1Q8NBB4 408 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 ZNF555Q8NEP9 628 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 PRSS33Q8NF86 280 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 OR1N1Q8NGS0 311 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 OR52J3Q8NH60 311 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 CYGBQ8WWM9 190 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 SLC35B4Q969S0 331 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 ALPK1Q96QP1 1244 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 SPSB2Q99619 263 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 WFDC6Q9BQY6 131 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 FUZQ9BT04 418 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 GABARAPL3Q9BY60 117 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 POLR2J2Q9GZM3 115 aaKnown RBP8.69□□□□□ -1.02
VPS52-216ENST00000471309 OR8D2Q9GZM6 311 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 POLR2J3Q9H1A7 115 aaKnown RBP8.69□□□□□ -1.02
VPS52-216ENST00000471309 ANKRD19PQ9H560 264 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 ARMC7Q9H6L4 198 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 NMNAT1Q9HAN9 279 aaPredicted RBP8.69□□□□□ -1.02
VPS52-216ENST00000471309 KRT84Q9NSB2 600 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 PNPLA3Q9NST1 481 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 FBXO34Q9NWN3 711 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 SLC39A1Q9NY26 324 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 NCDNQ9UBB6 729 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 RHCGQ9UBD6 479 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 COPS7AQ9UBW8 275 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 KCNE5Q9UJ90 142 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 CBLCQ9ULV8 474 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 POFUT2Q9Y2G5 429 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 OR10H1Q9Y4A9 318 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 LOXL2Q9Y4K0 774 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 PCDHGA1Q9Y5H4 931 aa8.69□□□□□ -1.02
VPS52-216ENST00000471309 RALGAPA1Q6GYQ0 2036 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 TRBV4-1A0A0J9YWV2 114 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 SAGE2PA6NJ88 616 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 A8MUA0 341 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 NPIPB9F8W1W9 429 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 SLC16A6O15403 523 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 GDF9O60383 454 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 FOXD2O60548 495 aaPredicted RBP8.68□□□□□ -1.02
VPS52-216ENST00000471309 FMO6PO60774 539 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 CNOT3O75175 753 aaKnown RBP8.68□□□□□ -1.02
VPS52-216ENST00000471309 ALOX12BO75342 701 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 TNFAIP8O95379 198 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 IGKV1D-16P01601 117 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 KLK3P07288 261 aaPredicted RBP8.68□□□□□ -1.02
VPS52-216ENST00000471309 HEXBP07686 556 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 GNAO1P09471 354 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 DRD5P21918 477 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 CBLP22681 906 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 SLC5A2P31639 672 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 RPS6KA3P51812 740 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 MYBPC1Q00872 1141 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 KCNAB2Q13303 367 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 PIN1Q13526 163 aaPredicted RBP8.68□□□□□ -1.02
VPS52-216ENST00000471309 BLMHQ13867 455 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 KEAP1Q14145 624 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 NNATQ16517 81 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 ISXQ2M1V0 245 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 ZIK1Q3SY52 487 aaPredicted RBP8.68□□□□□ -1.02
VPS52-216ENST00000471309 FGD3Q5JSP0 725 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 MRPL2Q5T653 305 aaKnown RBP8.68□□□□□ -1.02
VPS52-216ENST00000471309 ZNF770Q6IQ21 691 aaPredicted RBP8.68□□□□□ -1.02
VPS52-216ENST00000471309 KRT80Q6KB66 452 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 FAM198BQ6UWH4 519 aa8.68□□□□□ -1.02
VPS52-216ENST00000471309 ZNF517Q6ZMY9 492 aaPredicted RBP8.68□□□□□ -1.02
VPS52-216ENST00000471309 SHISA6Q6ZSJ9 500 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms