RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 UTS2O95399 124 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 CLDN14O95500 239 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 ALOX5P09917 674 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 ALDOCP09972 364 aaKnown RBP12.87□□□□□ -0.35
TOP3B-215ENST00000470338 KITP10721 976 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 BMP7P18075 431 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 EPHA3P29320 983 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 DCTP40126 519 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 NUP107P57740 925 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 HBA1P69905 142 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 PHC1P78364 1004 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 PMPCAQ10713 525 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 TOMM20Q15388 145 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.87□□□□□ -0.35
TOP3B-215ENST00000470338 ZNF630Q2M218 657 aaPredicted RBP12.87□□□□□ -0.35
TOP3B-215ENST00000470338 OR4F3Q6IEY1 312 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 B3GNT6Q6ZMB0 384 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 SZRD1Q7Z422 152 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 SPATA19Q7Z5L4 167 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 YRDCQ86U90 279 aaKnown RBP12.87□□□□□ -0.35
TOP3B-215ENST00000470338 ULK2Q8IYT8 1036 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 FADS6Q8N9I5 356 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 OR56A1Q8NGH5 318 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 PIWIL2Q8TC59 973 aaKnown RBP12.87□□□□□ -0.35
TOP3B-215ENST00000470338 RND1Q92730 232 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 MOAP1Q96BY2 351 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 RMND5BQ96G75 393 aaPredicted RBP12.87□□□□□ -0.35
TOP3B-215ENST00000470338 MAELQ96JY0 434 aaKnown RBP12.87□□□□□ -0.35
TOP3B-215ENST00000470338 STACQ99469 402 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 YIPF4Q9BSR8 244 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 RTN4RQ9BZR6 473 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 PRDM14Q9GZV8 571 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 PIGUQ9H490 435 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 WDR55Q9H6Y2 383 aaPredicted RBP12.87□□□□□ -0.35
TOP3B-215ENST00000470338 SDHAF3Q9NRP4 125 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 DUSP22Q9NRW4 184 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 AIG1Q9NVV5 245 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 GPATCH2Q9NW75 528 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 COQ3Q9NZJ6 369 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 MARCOQ9UEW3 520 aaPredicted RBP12.87□□□□□ -0.35
TOP3B-215ENST00000470338 FBXL2Q9UKC9 423 aa12.87□□□□□ -0.35
TOP3B-215ENST00000470338 DOCK7Q96N67 2140 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 AHRRA9YTQ3 701 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 ZNF195O14628 629 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 CFLARO15519 480 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 ZIC3O60481 467 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 ACTL6AO96019 429 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 NGFRP08138 427 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 GLI4P10075 376 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 HTR1EP28566 365 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 GRNP28799 593 aaKnown RBP12.86□□□□□ -0.35
TOP3B-215ENST00000470338 LCN1P31025 176 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 SRD5A2P31213 254 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 PTGER4P35408 488 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 KIR3DL1P43629 444 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 RFX3P48380 749 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 CLK3P49761 638 aaKnown RBP12.86□□□□□ -0.35
TOP3B-215ENST00000470338 CLNS1AP54105 237 aaKnown RBP12.86□□□□□ -0.35
TOP3B-215ENST00000470338 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
TOP3B-215ENST00000470338 DPY19L1Q2PZI1 675 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 GRAMD1BQ3KR37 738 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 C1orf185Q5T7R7 199 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 OR5M10Q6IEU7 315 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 CDC73Q6P1J9 531 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 APOOLQ6UXV4 268 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 PM20D2Q8IYS1 436 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 FBXO30Q8TB52 745 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 ASB5Q8WWX0 329 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 ABTB1Q969K4 478 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-215ENST00000470338 SDCCAG3Q96C92 435 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 DTNBP1Q96EV8 351 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 WDYHV1Q96HA8 205 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 BTBD2Q9BX70 525 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 UGT2B28Q9BY64 529 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 ACTRT3Q9BYD9 372 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 CHST11Q9NPF2 352 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 FBXO34Q9NWN3 711 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 ALKBH4Q9NXW9 302 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 PPP4R1LQ9P1A2 415 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 RNF6Q9Y252 685 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 GPR45Q9Y5Y3 372 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 KIAA1549Q9HCM3 1950 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 PKDREJQ9NTG1 2253 aa12.86□□□□□ -0.35
TOP3B-215ENST00000470338 MAST4O15021 2626 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 IGLV3-32A0A0A0MS00 114 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 GOLGA8QA0A0J9YX86 632 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 PRSS51A0A1B0GVH4 220 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 GOLGA8OA6NCC3 632 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 C17orf51A8MQB3 221 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 HMGB1P1B2RPK0 211 aaPredicted RBP12.85□□□□□ -0.35
TOP3B-215ENST00000470338 GOLGA8NF8WBI6 632 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 SCO2O43819 266 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 KRT16P08779 473 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 TBXA2RP21731 343 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 CHRNB4P30926 498 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 GFRA1P56159 465 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 DSCR4P56555 118 aaPredicted RBP12.85□□□□□ -0.35
TOP3B-215ENST00000470338 UFM1P61960 85 aa12.85□□□□□ -0.35
TOP3B-215ENST00000470338 POU6F2P78424 691 aaPredicted RBP12.85□□□□□ -0.35
TOP3B-215ENST00000470338 C17orf67Q0P5P2 114 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms