RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 DCST2Q5T1A1 773 aa13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 AP1ARQ63HQ0 302 aa13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 ANGPTL8Q6UXH0 198 aa13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 MTERF4Q7Z6M4 381 aaKnown RBP13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 ZFP62Q8NB50 900 aaPredicted RBP13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 FAM98AQ8NCA5 519 aaKnown RBP13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 OTUB1Q96FW1 271 aaPredicted RBP13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 AURKBQ96GD4 344 aaPredicted RBP13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 FRMD6Q96NE9 622 aa13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 LRRC37BQ96QE4 947 aa13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 ANGPTL4Q9BY76 406 aa13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 RAD21L1Q9H4I0 556 aa13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 KLHL1Q9NR64 748 aa13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 DEPPQ9NTK1 212 aa13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 THUMPD1Q9NXG2 353 aaKnown RBP13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 VAPAQ9P0L0 249 aa13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 CORO2BQ9UQ03 480 aa13.7□□□□□ -0.22
CDC42SE1-203ENST00000470278 PRAMEF25A6NGN4 478 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 CLIC1O00299 241 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 PEX1O43933 1283 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 HS6ST1O60243 411 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 SNX4O95219 450 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 BMP2P12643 396 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 CYP4B1P13584 511 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 CNR1P21554 472 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 PRDX6P30041 224 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 EVI2BP34910 448 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 CASP3P42574 277 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 FUT5Q11128 374 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 NFYCQ13952 458 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 ARHGAP11BQ3KRB8 267 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 ATAD3BQ5T9A4 648 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 REP15Q6BDI9 236 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 TNFAIP8L2Q6P589 184 aaPredicted RBP13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 TREML1Q86YW5 311 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 SULF2Q8IWU5 870 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 PCYOX1LQ8NBM8 494 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 CCDC197Q8NCU1 140 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 OR2M7Q8NG81 312 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 OR5M3Q8NGP4 307 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 PNPT1Q8TCS8 783 aaKnown RBP13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 OIT3Q8WWZ8 545 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 CMTM5Q96DZ9 223 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 NODALQ96S42 347 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 CGREF1Q99674 301 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 BARD1Q99728 777 aaKnown RBP13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 FAM173AQ9BQD7 235 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 ZNF350Q9GZX5 532 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 PROK2Q9HC23 129 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 POLE3Q9NRF9 147 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 LUZP4Q9P127 313 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 LIPT1Q9Y234 373 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 KCNE3Q9Y6H6 103 aa13.69□□□□□ -0.22
CDC42SE1-203ENST00000470278 A0A0G2JMM0 328 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 A0A1W2PPB8 328 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 A0A1W2PRS3 328 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 KIR3DP1A8MWS1 328 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 FXYD1O00168 92 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 NDUFAB1O14561 156 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 MRASO14807 208 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 ICOSLGO75144 302 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 UNC5CO95185 931 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 OR12D1P0DN82 309 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 COX4I1P13073 169 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 MEOX1P50221 254 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 FOXO1Q12778 655 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 RGNQ15493 299 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 HYAL4Q2M3T9 481 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 MMEL1Q495T6 779 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 RUNDC3AQ59EK9 446 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 COX20Q5RI15 118 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 PRAMEF20Q5VT98 475 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 DESI1Q6ICB0 168 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 SLC30A6Q6NXT4 461 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 FIGNL1Q6PIW4 674 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 C16orf62Q7Z3J2 963 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 FAM26EQ8N5C1 309 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 BCAS4Q8TDM0 211 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 TMEM41AQ96HV5 264 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 ANKRD27Q96NW4 1050 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 TAAR6Q96RI8 345 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 SDF2Q99470 211 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 CPPED1Q9BRF8 314 aaPredicted RBP13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 DOHHQ9BU89 302 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 OSBPL11Q9BXB4 747 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 METTL7AQ9H8H3 244 aa13.68□□□□□ -0.22
CDC42SE1-203ENST00000470278 EML6Q6ZMW3 1958 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 LOC100653049A0A140TA62 436 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 NPIPB9F8W1W9 429 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 ADAM10O14672 748 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 KIAA0513O60268 411 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 FADS1O60427 444 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 TRIM3O75382 744 aaPredicted RBP13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 STX11O75558 287 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 KRT34O76011 436 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 UTS2O95399 124 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 CRYABP02511 175 aaKnown RBP13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 GPX2P18283 190 aa13.67□□□□□ -0.22
CDC42SE1-203ENST00000470278 ATP6V1C1P21283 382 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms