RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 NRF1Q16656 503 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 PGGHGQ32M88 737 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 CYB5R2Q6BCY4 276 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 METTL4Q8N3J2 472 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 TM4SF18Q96CE8 201 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 C11orf24Q96F05 449 aaPredicted RBP16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 TRAF4Q9BUZ4 470 aaPredicted RBP16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 FAIMQ9NVQ4 179 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 TMEM160Q9NX00 188 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 CISD1Q9NZ45 108 aaKnown RBP16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 WHRNQ9P202 907 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 XPR1Q9UBH6 696 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 ACOT9Q9Y305 439 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 TNPO3Q9Y5L0 923 aaKnown RBP16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 YLPM1P49750 1951 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 E7ESA3 106 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 SIX3O95343 332 aaPredicted RBP16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 OPN1LWP04000 364 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 PYGBP11216 843 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 BSPH1Q075Z2 132 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 TAB1Q15750 504 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 GLYR1Q49A26 553 aaPredicted RBP16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 ZNF628Q5EBL2 1059 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 GRTP1Q5TC63 336 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 FIGNL1Q6PIW4 674 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 OR9A2Q8NGT5 310 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 OR10D3Q8NH80 312 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 RNF138Q8WVD3 245 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 KCTD4Q8WVF5 259 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 HSD17B8Q92506 261 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 MTBPQ96DY7 904 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 ADAD1Q96M93 576 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 VSTM2LQ96N03 204 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 ZNF681Q96N22 645 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 ELOVL6Q9H5J4 265 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 SAYSD1Q9NPB0 183 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 GLRX2Q9NS18 164 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 FBXO34Q9NWN3 711 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 CADP27708 2225 aa16.92■□□□□ 0.3
NCKIPSD-209ENST00000470006 NDUFB5O43674 189 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 CXCL13O43927 109 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 TUBBP07437 444 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 RFX3P48380 749 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 DSCR9P59020 149 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 VLDLRP98155 873 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 ZNF155Q12901 538 aaPredicted RBP16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 FAM83EQ2M2I3 478 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 ATG4DQ86TL0 474 aaPredicted RBP16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 MARCH3Q86UD3 253 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 GGNQ86UU5 652 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 WDR75Q8IWA0 830 aaKnown RBP16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 ARIH2OSQ8N7S6 290 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 RHEBL1Q8TAI7 183 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 ZNF675Q8TD23 568 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 PAQR5Q9NXK6 330 aaPredicted RBP16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 TAS2R9Q9NYW1 312 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 FLRT3Q9NZU0 649 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 VDAC3Q9Y277 283 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 B3GALT5Q9Y2C3 310 aa16.91■□□□□ 0.3
NCKIPSD-209ENST00000470006 TCRBV9S1A1TA0A576 114 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 OR7A17O14581 309 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 FADS1O60427 444 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 LMX1BO60663 402 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 CD8AP01732 235 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 THBS1P07996 1170 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 ZNF16P17020 682 aaPredicted RBP16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 ADH6P28332 368 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 THBS2P35442 1172 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 GTF2IRD2BQ6EKJ0 949 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 MFSD12Q6NUT3 480 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 C3orf62Q6ZUJ4 267 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 IL17RELQ6ZVW7 336 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 GTF2IRD2Q86UP8 949 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 PPM1NQ8N819 430 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 EXOSC8Q96B26 276 aaKnown RBP16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 ERP27Q96DN0 273 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 GIMAP4Q9NUV9 329 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 ABCG2Q9UNQ0 655 aa16.9■□□□□ 0.3
NCKIPSD-209ENST00000470006 FAM159BA6NKW6 160 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 TNFSF11O14788 317 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 NTN1O95631 604 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 AGTR1P30556 359 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 CDH11P55287 796 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 C21orf58P58505 322 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 IRF9Q00978 393 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 LOXL1Q08397 574 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 TMEM201Q5SNT2 666 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 AGAP6Q5VW22 663 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 LIPNQ5VXI9 398 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 DNAJC14Q6Y2X3 702 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 GALNT10Q86SR1 603 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 CCDC25Q86WR0 208 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 SLC35F6Q8N357 371 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 OR10H5Q8NGA6 315 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 KISS1RQ969F8 398 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 REXO5Q96IC2 774 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 TBL1XR1Q9BZK7 514 aa16.89■□□□□ 0.29
NCKIPSD-209ENST00000470006 RTN4RQ9BZR6 473 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms