RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 OR6T1Q8NGN1 323 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 ART4Q93070 314 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 SYAP1Q96A49 352 aaPredicted RBP3.99□□□□□ -1.77
LSM5-209ENST00000468872 PINX1Q96BK5 328 aaKnown RBP3.99□□□□□ -1.77
LSM5-209ENST00000468872 DNAJA3Q96EY1 480 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 C11orf24Q96F05 449 aaPredicted RBP3.99□□□□□ -1.77
LSM5-209ENST00000468872 RBM18Q96H35 190 aaKnown RBP3.99□□□□□ -1.77
LSM5-209ENST00000468872 TRIM9Q9C026 710 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 AMBNQ9NP70 447 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 AGPAT5Q9NUQ2 364 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 C1orf123Q9NWV4 160 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 BLOC1S6Q9UL45 172 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 DHRS7Q9Y394 339 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 MFHAS1Q9Y4C4 1052 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 MYO3AQ8NEV4 1616 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 RICTORQ6R327 1708 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 UNC13BO14795 1591 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 MYOM1P52179 1685 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 TDRD15B5MCY1 1934 aaKnown RBP3.98□□□□□ -1.77
LSM5-209ENST00000468872 IGHV3OR16-12A0A075B7B8 117 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 LRRC30A6NM36 301 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 ZNF487B1APH4 448 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 WASH3PC4AMC7 463 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 PEX11AO75192 247 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 GSTT2P0CG29 244 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 GSTT2BP0CG30 244 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 FOLR2P14207 255 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 AXLP30530 894 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 CYLC1P35663 651 aaPredicted RBP3.98□□□□□ -1.77
LSM5-209ENST00000468872 HSD17B7P56937 341 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 TRA2BP62995 288 aaKnown RBP3.98□□□□□ -1.77
LSM5-209ENST00000468872 ABRAXAS2Q15018 415 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 ZIC1Q15915 447 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 MS4A13Q5J8X5 152 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 RIPPLY2Q5TAB7 128 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 SULT1C3Q6IMI6 304 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 NIPAL3Q6P499 406 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 WASH2PQ6VEQ5 465 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 FGFRL1Q8N441 504 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 ARL14Q8N4G2 192 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 POM121L12Q8N7R1 296 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 ZNF671Q8TAW3 534 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 FNDC8Q8TC99 324 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 PIWIL1Q96J94 861 aaKnown RBP3.98□□□□□ -1.77
LSM5-209ENST00000468872 ZNF416Q9BWM5 594 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 GPN2Q9H9Y4 310 aaPredicted RBP3.98□□□□□ -1.77
LSM5-209ENST00000468872 LPAR2Q9HBW0 351 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 RAI14Q9P0K7 980 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 ARMCX1Q9P291 453 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 B9D1Q9UPM9 204 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 MEGF6O75095 1541 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 ZMYM4Q5VZL5 1548 aa3.98□□□□□ -1.77
LSM5-209ENST00000468872 SUPT6HQ7KZ85 1726 aaKnown RBP3.98□□□□□ -1.77
LSM5-209ENST00000468872 NPHP4O75161 1426 aaPredicted RBP3.97□□□□□ -1.77
LSM5-209ENST00000468872 C9orf84Q5VXU9 1444 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 TRABD2BA6NFA1 517 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 C11orf98E9PRG8 122 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 PHF1O43189 567 aaPredicted RBP3.97□□□□□ -1.77
LSM5-209ENST00000468872 LRRTM2O43300 516 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 NOL3O60936 208 aaKnown RBP3.97□□□□□ -1.77
LSM5-209ENST00000468872 CALCBP10092 127 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 THRBP10828 461 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 HMGCLP35914 325 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 NOVP48745 357 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 STK19P49842 368 aaPredicted RBP3.97□□□□□ -1.77
LSM5-209ENST00000468872 DSCR10P59022 87 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 IL9RQ01113 521 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 ZFP36L1Q07352 338 aaKnown RBP3.97□□□□□ -1.77
LSM5-209ENST00000468872 LTB4RQ15722 352 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 TMEM41BQ5BJD5 291 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 BTNL3Q6UXE8 466 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 CCBE1Q6UXH8 406 aaPredicted RBP3.97□□□□□ -1.77
LSM5-209ENST00000468872 GRAMD2AQ8IUY3 354 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 TOMM40LQ969M1 308 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 DTNBP1Q96EV8 351 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 HPDLQ96IR7 371 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 VPS35Q96QK1 796 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 PSMB7Q99436 277 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 TBCDQ9BTW9 1192 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 RPP25Q9BUL9 199 aaKnown RBP3.97□□□□□ -1.77
LSM5-209ENST00000468872 TBC1D10AQ9BXI6 508 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 ZBP1Q9H171 429 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 CALHM2Q9HA72 323 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 DHRS4-AS1Q9P1J3 65 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 CHMP2BQ9UQN3 213 aa3.97□□□□□ -1.77
LSM5-209ENST00000468872 EXOSC1Q9Y3B2 195 aaKnown RBP3.97□□□□□ -1.77
LSM5-209ENST00000468872 BAHCC1Q9P281 2608 aa3.96□□□□□ -1.77
LSM5-209ENST00000468872 A0A1B0GWJ7 208 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 WASHC1A8K0Z3 465 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 TM9SF1O15321 606 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 SH3BGRLO75368 114 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 MBD3O95983 291 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 SNRPCP09234 159 aaKnown RBP3.96□□□□□ -1.78
LSM5-209ENST00000468872 PVRP15151 417 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 TNNI3P19429 210 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 BCL3P20749 454 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 IGFBP5P24593 272 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 DLSTP36957 453 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 ELK3P41970 407 aa3.96□□□□□ -1.78
LSM5-209ENST00000468872 BRCC3P46736 316 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms