RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 PRPS2P11908 318 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 IFFO1Q0D2I5 559 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 KANK2Q63ZY3 851 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 Q6ZSR9 355 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 ADGRE4PQ86SQ3 457 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 MARCH3Q86UD3 253 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 CDC20BQ86Y33 519 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 FADS6Q8N9I5 356 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 FBXO30Q8TB52 745 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 AGR3Q8TD06 166 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 DUSP19Q8WTR2 217 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 FAM111AQ96PZ2 611 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 CCT7Q99832 543 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 MECRQ9BV79 373 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 TBL1XR1Q9BZK7 514 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 RTN4RQ9BZR6 473 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 REEP4Q9H6H4 257 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 PTGES2Q9H7Z7 377 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 CCM2LQ9NUG4 571 aaPredicted RBP19.71■□□□□ 0.75
TTC28-204ENST00000468807 FAM120CQ9NX05 1096 aaKnown RBP19.71■□□□□ 0.75
TTC28-204ENST00000468807 JKAMPQ9P055 326 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 PCNX3Q9H6A9 2034 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 TMEM233B4DJY2 109 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 SEC14L5O43304 696 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 SPAG7O75391 227 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 UTS2O95399 124 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 EPXP11678 715 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 PEPDP12955 493 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 ALDH3A1P30838 453 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 CPOXP36551 454 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 MANFP55145 182 aaKnown RBP19.7■□□□□ 0.74
TTC28-204ENST00000468807 B3GALT5-AS1P59052 145 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 SORDQ00796 357 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 GANABQ14697 944 aaKnown RBP19.7■□□□□ 0.74
TTC28-204ENST00000468807 RFTN2Q52LD8 501 aaPredicted RBP19.7■□□□□ 0.74
TTC28-204ENST00000468807 ZNF385BQ569K4 471 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 GALNT10Q86SR1 603 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 MEIOBQ8N635 442 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 TWIST2Q8WVJ9 160 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 SLC9A6Q92581 669 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 ZBED6CLQ96FA7 236 aaPredicted RBP19.7■□□□□ 0.74
TTC28-204ENST00000468807 UCN2Q96RP3 112 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 YIPF4Q9BSR8 244 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 ANKZF1Q9H8Y5 726 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 GALNT8Q9NY28 637 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 SLC17A7Q9P2U7 560 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 ST6GALNAC2Q9UJ37 374 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 PLEKHA6Q9Y2H5 1048 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 DNAJC15Q9Y5T4 150 aa19.7■□□□□ 0.74
TTC28-204ENST00000468807 C2CD3Q4AC94 2353 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 SLC22A20A6NK97 555 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 NPIPB8E9PQR5 432 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 H3BML4 177 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 LSM1O15116 133 aaKnown RBP19.69■□□□□ 0.74
TTC28-204ENST00000468807 TGM6O95932 706 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 EFNA1P20827 205 aaPredicted RBP19.69■□□□□ 0.74
TTC28-204ENST00000468807 DIO3P55073 304 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 VPS26BQ4G0F5 336 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 EXOC3L1Q86VI1 746 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 CNEP1R1Q8N9A8 125 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 BANPQ8N9N5 519 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 NUP43Q8NFH3 380 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 SMPDL3BQ92485 455 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 NINJ1Q92982 152 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 EML4Q9HC35 981 aaKnown RBP19.69■□□□□ 0.74
TTC28-204ENST00000468807 MKS1Q9NXB0 559 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 TMED5Q9Y3A6 229 aa19.69■□□□□ 0.74
TTC28-204ENST00000468807 PIP5K1BO14986 540 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 SMNDC1O75940 238 aaKnown RBP eCLIP19.68■□□□□ 0.74
TTC28-204ENST00000468807 ANGPTL1O95841 491 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 VSNL1P62760 191 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 DAZAP2Q15038 168 aaPredicted RBP19.68■□□□□ 0.74
TTC28-204ENST00000468807 BCL2A1Q16548 175 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 GRAMD1BQ3KR37 738 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 ARL13AQ5H913 290 aaPredicted RBP19.68■□□□□ 0.74
TTC28-204ENST00000468807 TRABD2AQ86V40 505 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 RIBC1Q8N443 379 aaPredicted RBP19.68■□□□□ 0.74
TTC28-204ENST00000468807 CEP70Q8NHQ1 597 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 C1GALT1C1Q96EU7 318 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 FCRL1Q96LA6 429 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 PIGMQ9H3S5 423 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 PACSIN3Q9UKS6 424 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 EDARQ9UNE0 448 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 ZNF337Q9Y3M9 751 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 TRAF6Q9Y4K3 522 aa19.68■□□□□ 0.74
TTC28-204ENST00000468807 SETD2Q9BYW2 2564 aaPredicted RBP19.68■□□□□ 0.74
TTC28-204ENST00000468807 ABCA4P78363 2273 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 ZFHX3Q15911 3703 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 A0A1W2PNV4 684 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 OR2M5A3KFT3 312 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 FAM221AA4D161 298 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 TTC36A6NLP5 189 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 H0YC42 278 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 HCRTR2O43614 444 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 NPHS1O60500 1241 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 IGKV1D-16P01601 117 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 IFI6P09912 130 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 DNASE1P24855 282 aa19.67■□□□□ 0.74
TTC28-204ENST00000468807 TPD52P55327 224 aaPredicted RBP19.67■□□□□ 0.74
TTC28-204ENST00000468807 EEFSECP57772 596 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms