RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 MRPS22P82650 360 aaKnown RBP16.22■□□□□ 0.19
COL7A1-205ENST00000465238 PLGLB1Q02325 96 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 GAB1Q13480 694 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 LASP1Q14847 261 aaKnown RBP16.22■□□□□ 0.19
COL7A1-205ENST00000465238 DECR1Q16698 335 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 AGKQ53H12 422 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 GK5Q6ZS86 529 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 MSANTD1Q6ZTZ1 278 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 TRIML2Q8N7C3 387 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 OR4N2Q8NGD1 307 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 PAQR8Q8TEZ7 354 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 DIO2Q92813 273 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 YIPF4Q9BSR8 244 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 DEFB127Q9H1M4 99 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 ZDHHC11Q9H8X9 412 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 TMEM45AQ9NWC5 275 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 CCDC167Q9P0B6 97 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 CBLCQ9ULV8 474 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 HRH3Q9Y5N1 445 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 AKAP9Q99996 3911 aa16.22■□□□□ 0.19
COL7A1-205ENST00000465238 PHF3Q92576 2039 aaKnown RBP16.22■□□□□ 0.19
COL7A1-205ENST00000465238 INTS1Q8N201 2190 aaKnown RBP16.21■□□□□ 0.19
COL7A1-205ENST00000465238 CCDC154A6NI56 674 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 ABCB7O75027 752 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 PDE9AO76083 593 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 SOX30O94993 753 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 NKX2-2O95096 273 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 POU3F2P20265 443 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-205ENST00000465238 CAPN3P20807 821 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 LSP1P33241 339 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 ZFP36L2P47974 494 aaKnown RBP16.21■□□□□ 0.19
COL7A1-205ENST00000465238 PNLIPRP2P54317 469 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 GNGT1P63211 74 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 EFR3AQ14156 821 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 TIGD2Q4W5G0 525 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 BLOC1S3Q6QNY0 202 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 MEX3BQ6ZN04 569 aaKnown RBP16.21■□□□□ 0.19
COL7A1-205ENST00000465238 ZNF621Q6ZSS3 439 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 C6orf120Q7Z4R8 191 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 SLC22A16Q86VW1 577 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 FBXW8Q8N3Y1 598 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 MARVELD2Q8N4S9 558 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 GOT1L1Q8NHS2 421 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-205ENST00000465238 FBXO30Q8TB52 745 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 SPPL2AQ8TCT8 520 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 ADAMTS15Q8TE58 950 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 HOXB13Q92826 284 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-205ENST00000465238 VPS33AQ96AX1 596 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 TMCO6Q96DC7 493 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 ITCHQ96J02 903 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 COL21A1Q96P44 957 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 ADOQ96SZ5 270 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 SECISBP2Q96T21 854 aaKnown RBP16.21■□□□□ 0.19
COL7A1-205ENST00000465238 TREX2Q9BQ50 279 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-205ENST00000465238 FAM173AQ9BQD7 235 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 ACTRT3Q9BYD9 372 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 NSRP1Q9H0G5 558 aaKnown RBP16.21■□□□□ 0.19
COL7A1-205ENST00000465238 SH2D2AQ9NP31 389 aa16.21■□□□□ 0.19
COL7A1-205ENST00000465238 CHCHD2Q9Y6H1 151 aaPredicted RBP16.21■□□□□ 0.19
COL7A1-205ENST00000465238 PINLYPA6NC86 204 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 GMNCA6NCL1 334 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 OR6C70A6NIJ9 312 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 G3V3Y1 287 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 RFXANKO14593 260 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 KCNH1O95259 989 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 ANP32DO95626 131 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 ACP2P11117 423 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 CHRNB4P30926 498 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 CHI3L1P36222 383 aaPredicted RBP16.2■□□□□ 0.18
COL7A1-205ENST00000465238 PIGAP37287 484 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 MAP3K8P41279 467 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 SEC24CP53992 1094 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 PSMD4P55036 377 aaKnown RBP16.2■□□□□ 0.18
COL7A1-205ENST00000465238 KCNJ2P63252 427 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 EMC4Q5J8M3 183 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 TBCELQ5QJ74 424 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 PRAMEF20Q5VT98 475 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 CDC73Q6P1J9 531 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 CLEC4FQ8N1N0 589 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 SLC16A11Q8NCK7 471 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 PIK3R3Q92569 461 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 RND1Q92730 232 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 EFHD2Q96C19 240 aaPredicted RBP16.2■□□□□ 0.18
COL7A1-205ENST00000465238 SLC35A4Q96G79 324 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 SLC35G5Q96KT7 338 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 INPP5KQ9BT40 448 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 TTTY12Q9BZ98 90 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 PIGUQ9H490 435 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 METTL7AQ9H8H3 244 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 MRGBPQ9NV56 204 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 GPATCH2Q9NW75 528 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 CNOT11Q9UKZ1 510 aaKnown RBP16.2■□□□□ 0.18
COL7A1-205ENST00000465238 PCDHGB3Q9Y5G1 929 aa16.2■□□□□ 0.18
COL7A1-205ENST00000465238 HCFC1P51610 2035 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 HIVEP1P15822 2718 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 GXYLT2A0PJZ3 443 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 OR14I1A6ND48 311 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 FAM166BA8MTA8 275 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 NR5A2O00482 541 aa16.19■□□□□ 0.18
COL7A1-205ENST00000465238 TSPAN2O60636 221 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms