RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 AJUBAQ96IF1 538 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 CCDC140Q96MF4 163 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 RHNO1Q9BSD3 238 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 TACO1Q9BSH4 297 aaKnown RBP4.53□□□□□ -1.68
BRCA1-206ENST00000461574 JAM3Q9BX67 310 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 MS4A8Q9BY19 250 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 PRRG4Q9BZD6 226 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 SLCO5A1Q9H2Y9 848 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 NT5DC2Q9H857 520 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 GALNT9Q9HCQ5 603 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 DNAJC11Q9NVH1 559 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 MOCS1Q9NZB8 636 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 GPRC5BQ9NZH0 403 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 CTNNAL1Q9UBT7 734 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 FETUBQ9UGM5 382 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 CORO1CQ9ULV4 474 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-206ENST00000461574 REXO2Q9Y3B8 237 aaKnown RBP4.53□□□□□ -1.68
BRCA1-206ENST00000461574 OARD1Q9Y530 152 aa4.53□□□□□ -1.68
BRCA1-206ENST00000461574 PRAMEF25A6NGN4 478 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 LRRC14BA6NHZ5 514 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 EMC8O43402 210 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 SPRY1O43609 319 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 SSX4O60224 188 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 CCNT2O60583 730 aaKnown RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 ICOSLGO75144 302 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 PRKRAO75569 313 aaKnown RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 GPR75O95800 540 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 TTC4O95801 387 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 PLAUP00749 431 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 AHSGP02765 367 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 FCGR2AP12318 317 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 ZNF708P17019 499 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 SRD5A1P18405 259 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 HNF1AP20823 631 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 NT5EP21589 574 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 CNTFP26441 200 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 PIK3R1P27986 724 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 SERPINB1P30740 379 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 SRD5A2P31213 254 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 KRT20P35900 424 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 SLC6A12P48065 614 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 HSPA7P48741 367 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 PCYT1AP49585 367 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 LHX2P50458 406 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 NUDT6P53370 316 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 SLC12A2P55011 1212 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 CTBP2P56545 445 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 EEFSECP57772 596 aaKnown RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 PHEXP78562 749 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 CDKL1Q00532 357 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 PLCXD2Q0VAA5 305 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 CHIT1Q13231 466 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 ZNF460Q14592 562 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 TSNQ15631 228 aaKnown RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 SGCBQ16585 318 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 FBXO48Q5FWF7 155 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 SPANXN3Q5MJ09 141 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 KHDRBS2Q5VWX1 349 aaKnown RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 LIPNQ5VXI9 398 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 RAET1LQ5VY80 246 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 C18orf63Q68DL7 685 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 OR4C11Q6IEV9 310 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 MED27Q6P2C8 311 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 RAD9BQ6WBX8 426 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 SH2D5Q6ZV89 423 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 ADGRE4PQ86SQ3 457 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 TCAIMQ8N3R3 496 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 ZNF610Q8N9Z0 462 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 EXT2Q93063 718 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 GFM2Q969S9 779 aaKnown RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 RGMAQ96B86 450 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 OMA1Q96E52 524 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 CMTM7Q96FZ5 175 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 CERS2Q96G23 380 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 PDLIM5Q96HC4 596 aaKnown RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 MARK4Q96L34 752 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 DESI2Q9BSY9 194 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 NTMT1Q9BV86 223 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 SORBS1Q9BX66 1292 aaKnown RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 PINK1Q9BXM7 581 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 OR2B2Q9GZK3 357 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 STMN4Q9H169 189 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 TSPY26PQ9H489 355 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 EHD1Q9H4M9 534 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 ESRP2Q9H6T0 727 aaKnown RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 CHODLQ9H9P2 273 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 FAIMQ9NVQ4 179 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 LYARQ9NX58 379 aaKnown RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 EHD3Q9NZN3 535 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 CD274Q9NZQ7 290 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 SLC17A6Q9P2U8 582 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 C11orf21Q9P2W6 132 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 BCAP29Q9UHQ4 241 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 IKZF3Q9UKT9 509 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 EXO1Q9UQ84 846 aaKnown RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 LIPT1Q9Y234 373 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 VWA7Q9Y334 891 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 RNF115Q9Y4L5 304 aa4.52□□□□□ -1.69
BRCA1-206ENST00000461574 MAGED1Q9Y5V3 778 aaPredicted RBP4.52□□□□□ -1.69
BRCA1-206ENST00000461574 PKD1L1Q8TDX9 2849 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms