RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 ARNTL2Q8WYA1 636 aa2.03□□□□□ -2.08
TTC3-211ENST00000460328 HAVCR1Q96D42 359 aa2.03□□□□□ -2.08
TTC3-211ENST00000460328 CCDC51Q96ER9 411 aa2.03□□□□□ -2.08
TTC3-211ENST00000460328 DTD2Q96FN9 168 aa2.03□□□□□ -2.08
TTC3-211ENST00000460328 VPS39Q96JC1 886 aa2.03□□□□□ -2.08
TTC3-211ENST00000460328 CBWD1Q9BRT8 395 aa2.03□□□□□ -2.08
TTC3-211ENST00000460328 NDUFAF3Q9BU61 184 aa2.03□□□□□ -2.08
TTC3-211ENST00000460328 PNO1Q9NRX1 252 aaKnown RBP2.03□□□□□ -2.08
TTC3-211ENST00000460328 GHRLQ9UBU3 117 aa2.03□□□□□ -2.08
TTC3-211ENST00000460328 PPIAL4AQ9Y536 164 aa2.03□□□□□ -2.08
TTC3-211ENST00000460328 MYO10Q9HD67 2058 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 DHX29Q7Z478 1369 aaKnown RBP2.02□□□□□ -2.09
TTC3-211ENST00000460328 DHRS7CA6NNS2 312 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 ERVV-1B6SEH8 477 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 BUB1O43683 1085 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 HSF2BPO75031 334 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 WISP3O95389 354 aaPredicted RBP2.02□□□□□ -2.09
TTC3-211ENST00000460328 TIMP1P01033 207 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 ZCCHC18P0CG32 403 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 TOP1P11387 765 aaKnown RBP2.02□□□□□ -2.09
TTC3-211ENST00000460328 RPS2P15880 293 aaKnown RBP2.02□□□□□ -2.09
TTC3-211ENST00000460328 VDAC1P21796 283 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 CASP3P42574 277 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 TLE4Q04727 773 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 NME3Q13232 169 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 SHHQ15465 462 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 MPPED2Q15777 294 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 UBE2V2Q15819 145 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 ZNF630Q2M218 657 aaPredicted RBP2.02□□□□□ -2.09
TTC3-211ENST00000460328 PARP6Q2NL67 630 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 AGKQ53H12 422 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 ZNF691Q5VV52 312 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 OR5M10Q6IEU7 315 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 BTNL3Q6UXE8 466 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 H1FOOQ8IZA3 346 aaPredicted RBP2.02□□□□□ -2.09
TTC3-211ENST00000460328 WDR36Q8NI36 951 aaKnown RBP2.02□□□□□ -2.09
TTC3-211ENST00000460328 ANKRD49Q8WVL7 239 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 NEIL2Q969S2 332 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 PSMG2Q969U7 264 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 COQ7Q99807 217 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 NACA2Q9H009 215 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 C2orf40Q9H1Z8 148 aa2.02□□□□□ -2.09
TTC3-211ENST00000460328 RLFQ13129 1914 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 A0A1W2PQ67 120 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 TUBAL3A6NHL2 446 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 C19orf81C9J6K1 198 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 ABCD4O14678 606 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 PPIHO43447 177 aaKnown RBP2.01□□□□□ -2.09
TTC3-211ENST00000460328 TBL1XO60907 577 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 LYPLA1O75608 230 aaPredicted RBP2.01□□□□□ -2.09
TTC3-211ENST00000460328 OR8U8P0C7N1 319 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 SRP54P61011 504 aaKnown RBP2.01□□□□□ -2.09
TTC3-211ENST00000460328 IL9RQ01113 521 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 PLOD1Q02809 727 aaPredicted RBP2.01□□□□□ -2.09
TTC3-211ENST00000460328 TSTA3Q13630 321 aaPredicted RBP2.01□□□□□ -2.09
TTC3-211ENST00000460328 MORF4L2Q15014 288 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 HFEQ30201 348 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 SULT1C3Q6IMI6 304 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 DLEU7Q6UYE1 221 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 P4HA3Q7Z4N8 544 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 GOLGA7Q7Z5G4 137 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 CCDC91Q7Z6B0 441 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 KRT77Q7Z794 578 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 IQCA1Q86XH1 822 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 CCDC36Q8IYA8 594 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 ZNF100Q8IYN0 542 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 ZBTB44Q8NCP5 570 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 ZNF540Q8NDQ6 660 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 FBXO30Q8TB52 745 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 DCUN1D4Q92564 292 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 MCHR2Q969V1 340 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 COMMD8Q9NX08 183 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 EHFQ9NZC4 300 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 ONECUT1Q9UBC0 465 aa2.01□□□□□ -2.09
TTC3-211ENST00000460328 EXOSC1Q9Y3B2 195 aaKnown RBP2.01□□□□□ -2.09
TTC3-211ENST00000460328 THSD7BQ9C0I4 1608 aa2□□□□□ -2.09
TTC3-211ENST00000460328 IGKV2D-24A0A075B6R9 120 aa2□□□□□ -2.09
TTC3-211ENST00000460328 SAGE2PA6NJ88 616 aa2□□□□□ -2.09
TTC3-211ENST00000460328 CASKO14936 926 aa2□□□□□ -2.09
TTC3-211ENST00000460328 SUPT7LO94864 414 aa2□□□□□ -2.09
TTC3-211ENST00000460328 GOSR1O95249 250 aa2□□□□□ -2.09
TTC3-211ENST00000460328 JCHAINP01591 159 aa2□□□□□ -2.09
TTC3-211ENST00000460328 SEMG1P04279 462 aa2□□□□□ -2.09
TTC3-211ENST00000460328 TSPAN8P19075 237 aa2□□□□□ -2.09
TTC3-211ENST00000460328 CCNA2P20248 432 aa2□□□□□ -2.09
TTC3-211ENST00000460328 CD1BP29016 333 aa2□□□□□ -2.09
TTC3-211ENST00000460328 ADORA2BP29275 332 aa2□□□□□ -2.09
TTC3-211ENST00000460328 DHPSP49366 369 aaPredicted RBP2□□□□□ -2.09
TTC3-211ENST00000460328 LIM2P55344 173 aa2□□□□□ -2.09
TTC3-211ENST00000460328 SSTP61278 116 aa2□□□□□ -2.09
TTC3-211ENST00000460328 TIMM10P62072 90 aa2□□□□□ -2.09
TTC3-211ENST00000460328 MRPS6P82932 125 aaKnown RBP2□□□□□ -2.09
TTC3-211ENST00000460328 ZNF154Q13106 437 aa2□□□□□ -2.09
TTC3-211ENST00000460328 DPYSL3Q14195 570 aa2□□□□□ -2.09
TTC3-211ENST00000460328 KARSQ15046 597 aaKnown RBP2□□□□□ -2.09
TTC3-211ENST00000460328 ACSF3Q4G176 576 aaPredicted RBP2□□□□□ -2.09
TTC3-211ENST00000460328 TEX44Q53QW1 395 aa2□□□□□ -2.09
TTC3-211ENST00000460328 SLC39A4Q6P5W5 647 aa2□□□□□ -2.09
TTC3-211ENST00000460328 Q7L0L9 218 aa2□□□□□ -2.09
TTC3-211ENST00000460328 ZNF589Q86UQ0 364 aaPredicted RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms